Evidence map›Paper›PMID 38298616›Full record

ArticleHeliyon2024

Multi-epitopes vaccine design for surface glycoprotein against SARS-CoV-2 using immunoinformatic approach.

Sarmad Frogh Arshad, Rehana Rehana, Muhammad Asif Saleem, Muhammad Usman, Hasan Junaid Arshad, Rizwana Rizwana, Shakeela Shakeela, Asma Shah Rukh, Imran Ahmad Khan, M Ali Hayssam and 1 more

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Frontiers in immunology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sarmad Frogh ArshadDepartment of Biochemistry and Biotechnology, Muhammad Nawaz Shareef University of Agriculture, Multan, 66000, Pakistan.
Rehana RehanaInstitute of Plant Breeding & Biotechnology (IPBB), Muhammad Nawaz Shareef University of Agriculture, Multan, 66000, Pakistan.
Muhammad Asif SaleemDepartment of Plant Breeding and Genetics, Bahauddin Zakaria University, Multan, 60800, Pakistan.
Muhammad UsmanDepartment of Biochemistry and Biotechnology, Muhammad Nawaz Shareef University of Agriculture, Multan, 66000, Pakistan.
Hasan Junaid ArshadCentre of Agricultural Biochemistry and Biotechnology, University of Agriculture, Faisalabad, 38000, Pakistan.
Rizwana RizwanaDepartment of Biochemistry, Bahauddin Zakaria University, Multan, 60800, Pakistan.
Shakeela ShakeelaCollage of Nursing, D.H.Q. Hospital, Chakwal, Punjab, Pakistan.
Asma Shah RukhDepartment of Pharmacy, College of Pharmacy Punjab University, Lahore, 54590, Pakistan.
Imran Ahmad KhanDepartment of Pharmacy, MNS University of Agriculture, Multan, 54590, Pakistan.
M Ali HayssamDepartment of Botany and Microbiology, College of Science, King Saud University, Riyadh, 1145, Saudi Arabia.
Muhammad AnwarSchool of Tropical Agriculture and Forestry, Hainan University, Haikou, PR China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The recent COVID vaccinations have successfully reduced death and severity but did not stop the transmission of viruses by the emerging SARS-CoV-2 strain. There is a need for better and long-lasting dynamic vaccines for numerous prevailing strains and the evolving SARS-CoV-2 virus, necessitating the development of broad-spectrum strains being used to stop infection by reducing the spread rate and re-infection. The spike (S) glycoprotein is one of the proteins expressed commonly in the early phases of SARS-CoV-2 infection. It has been identified as the most immunogenic protein of SARS-CoV-2. Methods: In this study, advanced bioinformatics techniques have been exploited to design the novel multi-epitope vaccine using conserved S protein portions from widespread strains of SARS-CoV-2 to predict B cell and T cell epitopes. These epitopes were selected based on toxicity, antigenicity score and immunogenicity. Epitope combinations were used to construct the maximum potent multi-epitope construct with potential immunogenic features. EAAAK, AAY, and GPGPG were used as linkers to construct epitopes. Results: The developed vaccine has shown positive results. After the chimeric vaccine construct was cloned into the PET28a (+) vector for expression screening in Conclusion: The construct vaccine performed well in computer-based immune response simulation and covered a variety of allelic populations. These computational results are more helpful for further analysis of our contract vaccine, which can finally help control and prevent SARS-CoV-2 infections worldwide.

Indexed as

AntigenicityB cellConstructEpitopesImmunePredictionT cellVector

Identifiers

PMID38298616
PMCPMC10827691

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.