Evidence map›Paper›PMID 38297004›Full record

ArticleScientific reports2024

MALDI-TOF as a powerful tool for identifying and differentiating closely related microorganisms: the strange case of three reference strains of Paenibacillus polymyxa.

Ilaria Lebano, Fabio Fracchetti, Mario Li Vigni, Juan Fernando Mejia, Giovanna Felis, Silvia Lampis

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Pangenome analysis ofApplied and environmental microbiology · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Ilaria LebanoSyngenta Biologicals (Valagro SpA), 66041, Atessa, CH, Italy. ilaria.lebano@syngenta.com.
Fabio FracchettiMicrobion S.r.l., 37057, San Giovanni Lupatoto, VR, Italy.
Mario Li VigniSyngenta Biologicals (Valagro SpA), 66041, Atessa, CH, Italy.
Juan Fernando MejiaSyngenta Biologicals (Valagro SpA), 66041, Atessa, CH, Italy.
Giovanna FelisDepartment of Biotechnology and VUCC-DBT Verona University Culture Collection, University of Verona, 37154, Verona, VR, Italy.
Silvia LampisDepartment of Biotechnology and VUCC-DBT Verona University Culture Collection, University of Verona, 37154, Verona, VR, Italy. silvia.lampis@univr.it.
University of Verona · ITSyngenta (Switzerland) · CHTechnobiochip (Italy) · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate identification and typing of microbes are crucial steps in gaining an awareness of the biological heterogeneity and reliability of microbial material within any proprietary or public collection. Paenibacillus polymyxa is a bacterial species of great agricultural and industrial importance due to its plant growth-promoting activities and production of several relevant secondary metabolites. In recent years, matrix-assisted laser desorption ionisation time-of-flight mass spectrometry (MALDI-TOF MS) has been widely used as an alternative rapid tool for identifying, typing, and differentiating closely related strains. In this study, we investigated the diversity of three P. polymyxa strains. The mass spectra of ATCC 842

Indexed as

Paenibacillus polymyxaProteomicsReproducibility of ResultsRNA, Ribosomal, 16SSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationRNA, Ribosomal, 16S

Identifiers

PMID38297004
PMCPMC10831075
OpenAlexW4391404149

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.