Evidence map›Paper›PMID 38294943›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

The ubiquitin E3 ligase BFAR promotes degradation of PNPLA3.

Avash Das, Haili Cheng, Yang Wang, Lisa N Kinch, Guosheng Liang, Sen Hong, Helen H Hobbs, Jonathan C Cohen

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Essential Biology of Lipid Droplets.Annual review of biochemistry · 2025
    Review
  6. Article
  7. Article
  8. Experimental Models to Investigate PNPLA3 in Liver Steatosis.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Review
  9. Targeting PNPLA3 to Treat MASH and MASH Related Fibrosis and Cirrhosis.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Review
  10. Review
  11. Review
  12. Profile of Jonathan C. Cohen.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Avash Das *Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Haili Cheng *Department of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Yang WangDepartment of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Lisa N KinchHHMI, University of Texas Southwestern Medical Center, Dallas, TX 75390.ORCID 0000-0003-3041-2615
Guosheng LiangDepartment of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Sen HongDepartment of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.
Helen H HobbsDepartment of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.ORCID 0000-0002-8700-9897
Jonathan C CohenDepartment of Molecular Genetics, University of Texas Southwestern Medical Center, Dallas, TX 75390.ORCID 0000-0003-0984-2864
The University of Texas Southwestern Medical Center · US

Funding

Tissue Culture & Antibody Production CoreP01HL160487 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI Helen Haskell Hobbs · 2022 to 2026
$14.9M
Role of PNPLA3 in Fatty Liver DiseaseR01DK090066 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI JONATHAN Charles COHEN, Helen Haskell Hobbs · 2011 to 2026
$7.8M
UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Jeff G McDonald · 2022 to 2026
$7.4M
NHLBI NIH HHS P01 HL160487NIDDK NIH HHS P30 DK127984NIDDK NIH HHS R01 DK090066
6 · The paper itself

Abstract

A missense variant in patatin-like phospholipase domain-containing protein 3 [PNPLA3(I148M)] is the most impactful genetic risk factor for fatty liver disease (FLD). We previously showed that PNPLA3 is ubiquitylated and subsequently degraded by proteasomes and autophagosomes and that the PNPLA3(148M) variant interferes with this process. To define the machinery responsible for PNPLA3 turnover, we used small interfering (si)RNAs to inactivate components of the ubiquitin proteasome system. Inactivation of bifunctional apoptosis regulator (BFAR), a membrane-bound E3 ubiquitin ligase, reproducibly increased PNPLA3 levels in two lines of cultured hepatocytes. Conversely, overexpression of BFAR decreased levels of endogenous PNPLA3 in HuH7 cells. BFAR and PNPLA3 co-immunoprecipitated when co-expressed in cells. BFAR promoted ubiquitylation of PNPLA3 in vitro in a reconstitution assay using purified, epitope-tagged recombinant proteins. To confirm that BFAR targets PNPLA3, we inactivated

Indexed as

Adaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsMembrane ProteinsNon-alcoholic Fatty Liver DiseaseAcyltransferasesAnimalsCell Line, TumorHepatocytesHumansMicePhospholipases A2, Calcium-IndependentUbiquitinUbiquitin-Protein LigasesAcyltransferasesAdaptor Proteins, Signal TransducingApoptosis Regulatory ProteinsMembrane ProteinsPhospholipases A2, Calcium-IndependentPNPLA3 protein, mouseUbiquitinUbiquitin-Protein Ligaseshepatocytelipid dropletsmutationsteatosisubiquitin proteasome system

Identifiers

PMID38294943
PMCPMC10861911
OpenAlexW4391383407

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.