Evidence map›Paper›PMID 38294574›Full record

ArticleMarine biotechnology (New York, N.Y.)2024

Sex-Biased Transcription Expression of Vitellogenins Reveals Fusion Gene and MicroRNA Regulation in the Sea Louse Caligus rogercresseyi.

Antonio Casuso, Bárbara P Benavente, Yeny Leal, Crisleri Carrera-Naipil, Valentina Valenzuela-Muñoz, Cristian Gallardo-Escárate

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Antonio CasusoInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile.
Bárbara P BenaventeInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile.
Yeny LealInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile.
Crisleri Carrera-NaipilInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile.
Valentina Valenzuela-MuñozInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile.
Cristian Gallardo-EscárateInterdisciplinary Center for Aquaculture Research (INCAR), Universidad de Concepción, Concepción, Chile. crisgallardo@udec.cl.
Interdisciplinary Center for Aquaculture Research · CLUniversity of Concepción · CL

Funding

Fondo de Financiamiento de Centros de Investigación en Áreas Prioritarias 15110027Fondo Nacional de Desarrollo Científico y Tecnológico 1210852
6 · The paper itself

Abstract

The caligid ectoparasite, Caligus rogercresseyi, is one of the main concerns in the Chilean salmon industry. The molecular mechanisms displayed by the parasite during the reproductive process represent an opportunity for developing novel control strategies. Vitellogenin is a multifunctional protein recognized as a critical player in several crustaceans' biological processes, including reproduction, embryonic development, and immune response. This study aimed to characterize the C. rogercresseyi vitellogenins, including discovering novel transcripts and regulatory mechanisms associated with microRNAs. Herein, vitellogenin genes were identified by homology analysis using the reference sea louse genome, transcriptome database, and arthropods vitellogenin-protein database. The validation of expression transcripts was conducted by RNA nanopore sequencing technology. Moreover, fusion gene profiling, miRNA target analysis, and functional validation were performed using luciferase assay. Six putative vitellogenin genes were identified in the C. rogercresseyi genome with high homology with other copepods vitellogenins. Furthermore, miR-996 showed a putative role in regulating the Cr_Vitellogenin1 gene, which is highly expressed in females. Moreover, vitellogenin-fusion genes were identified in adult stages and highly regulated in males, demonstrating sex-related expression patterns. In females, the identified fusion genes merged with several non-vitellogenin genes involved in biological processes of ribosome assembly, BMP signaling pathway, and biosynthetic processes. This study reports the genome array of vitellogenins in C. rogercresseyi for the first time, revealing the putative role of fusion genes and miRNA regulation in sea lice biology.

Indexed as

CopepodaMicroRNAsVitellogeninsAnimalsFemaleGene Expression ProfilingGene Expression RegulationMaleTranscriptomeMicroRNAsVitellogeninsCaligus rogercresseyiFusion geneMicroRNAMiR-996Vitellogenin

Identifiers

PMID38294574
OpenAlexW4391389562

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.