Evidence map›Paper›PMID 38294550›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2024

Genetic gains in IRRI's rice salinity breeding and elite panel development as a future breeding resource.

Apurva Khanna, Mahender Anumalla, Joie Ramos, Ma Teresa Sta Cruz, Margaret Catolos, Andres Godwin Sajise, Glenn Gregorio, Shalabh Dixit, Jauhar Ali, Md Rafiqul Islam and 6 more

Abstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
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  4. 110 years of rice breeding at LSU: realized genetic gains and future optimization.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  5. Article
  6. IntegratingFrontiers in plant science · 2025
    Article
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Apurva KhannaRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Mahender AnumallaRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Joie RamosRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Ma Teresa Sta CruzRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Margaret CatolosRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Andres Godwin SajiseRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Glenn GregorioSoutheast Asian Regional Center for Graduate Study and Research in Agriculture (SEARCA) and University of Philippines, 4031, Los Baños, Laguna, Philippines.
Shalabh DixitRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Jauhar AliRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Md Rafiqul IslamIRRI South Asia Regional Center (IRRI-SA Hub), Hyderabad, Telangana, 502324, India.
Vikas Kumar SinghIRRI South Asia Regional Center (IRRI-SA Hub), Hyderabad, Telangana, 502324, India.
Md Akhlasur RahmanPlant Breeding Division, Bangladesh Rice Research Institute (BRRI), Gazipur, 1701, Bangladesh.
Hasina KhatunPlant Breeding Division, Bangladesh Rice Research Institute (BRRI), Gazipur, 1701, Bangladesh.
Daniel Joseph PisanoRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Sankalp BhosaleRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.
Waseem HussainRice Breeding Innovation Platform, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines. waseem.hussain@irri.org.ORCID http://orcid.org/0000-0002-6861-0193

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageEstimating genetic gains and formulating a future salinity elite breeding panel for rice pave the way for developing better high-yielding salinity tolerant lines with enhanced genetic gains. Genetic gain is a crucial parameter to check the breeding program's success and help optimize future breeding strategies for enhanced genetic gains. To estimate the genetic gains in IRRI's salinity breeding program and identify the best genotypes based on high breeding values for grain yield (kg/ha), we analyzed the historical data from the trials conducted in the IRRI, Philippines and Bangladesh. A two-stage mixed-model approach accounting for experimental design factors and a relationship matrix was fitted to obtain the breeding values for grain yield and estimate genetic trends. A positive genetic trend of 0.1% per annum with a yield advantage of 1.52 kg/ha was observed in IRRI, Philippines. In Bangladesh, we observed a genetic gain of 0.31% per annum with a yield advantage of 14.02 kg/ha. In the released varieties, we observed a genetic gain of 0.12% per annum with a 2.2 kg/ha/year yield advantage in the IRRI, Philippines. For the Bangladesh dataset, a genetic gain of 0.14% per annum with a yield advantage of 5.9 kg/ha/year was observed in the released varieties. Based on breeding values for grain yield, a core set of the top 145 genotypes with higher breeding values of > 2400 kg/ha in the IRRI, Philippines, and > 3500 kg/ha in Bangladesh with a reliability of > 0.4 were selected to develop the elite breeding panel. Conclusively, a recurrent selection breeding strategy integrated with novel technologies like genomic selection and speed breeding is highly required to achieve higher genetic gains in IRRI's salinity breeding programs.

Indexed as

OryzaBangladeshEdible GrainPlant BreedingReproducibility of ResultsSalinity

Identifiers

PMID38294550
PMCPMC10830834

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.