Evidence map›Paper›PMID 38293740›Full record

ArticleACS chemical biology2024

Activity of Gut-Derived Nisin-like Lantibiotics against Human Gut Pathogens and Commensals.

Zhenrun J Zhang, Chunyu Wu, Ryan Moreira, Darian Dorantes, Téa Pappas, Anitha Sundararajan, Huaiying Lin, Eric G Pamer, Wilfred A van der Donk

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Microorganisms · 2025
    Review
  12. Article
  13. Bibacillin 1: A two-component lantibiotic frombioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Zhenrun J ZhangDuchossois Family Institute, University of Chicago, Chicago, Illinois 60637, United States.ORCID 0000-0002-2124-5539
Chunyu WuDepartment of Biochemistry, University of Illinois at Urbana─Champaign, Urbana, Illinois 61801, United States.ORCID 0000-0002-0312-3247
Ryan MoreiraDepartment of Chemistry, The Howard Hughes Medical Institute, University of Illinois at Urbana─Champaign, Urbana, Illinois 61801, United States.ORCID 0000-0003-0694-219X
Darian DorantesDepartment of Biochemistry, University of Illinois at Urbana─Champaign, Urbana, Illinois 61801, United States.
Téa PappasDuchossois Family Institute, University of Chicago, Chicago, Illinois 60637, United States.
Anitha SundararajanDuchossois Family Institute, University of Chicago, Chicago, Illinois 60637, United States.
Huaiying LinDuchossois Family Institute, University of Chicago, Chicago, Illinois 60637, United States.
Eric G PamerDuchossois Family Institute, University of Chicago, Chicago, Illinois 60637, United States.
Wilfred A van der DonkDepartment of Biochemistry, University of Illinois at Urbana─Champaign, Urbana, Illinois 61801, United States.ORCID 0000-0002-5467-7071
University of Chicago · USHoward Hughes Medical Institute · USUniversity of Illinois Urbana-Champaign · US

Funding

T LYMPHOCYTE SUBSET FUNCTION POST-TRANSPLANTATIONP01CA023766 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SCHEINBERG, DAVID A · 1985 to 2023
$59.0M
Systems Biology of Microbiome-mediated Resilience to Antibiotic-resistant PathogensU01AI124275 · NIAID · SLOAN-KETTERING INST CAN RESEARCH · PI PAMER, ERIC G., XAVIER, JOAO · 2016 to 2020
$8.9M
TNF Mediated Immune Defense Against Listeria InfectionR01AI042135 · NIAID · YALE UNIVERSITY · PI PAMER, ERIC G. · 1998 to 2019
$7.3M
Innate Immune Defense against Clostridium Difficile InfectionR01AI095706 · NIAID · UNIVERSITY OF CHICAGO · PI PAMER, ERIC G. · 2012 to 2020
$3.4M
4800 Plus MALDI TOF/TOF AnalyzerS10RR027109 · NCRR · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI VAN DER DONK, WILFRED A. · 2010 to 2010
$395k
NCI NIH HHS P01 CA023766NCRR NIH HHS S10 RR027109NIAID NIH HHS R01 AI042135NIAID NIH HHS R01 AI095706NIAID NIH HHS U01 AI124275
6 · The paper itself

Abstract

Recent advances in sequencing techniques unveiled the vast potential of ribosomally synthesized and post-translationally modified peptides (RiPPs) encoded in microbiomes. Class I lantibiotics such as nisin A, widely used as a food preservative, have been investigated for their efficacy in killing pathogens. However, the impact of nisin and nisin-like class I lantibiotics on commensal bacteria residing in the human gut remains unclear. Here, we report six gut-derived class I lantibiotics that are close homologues of nisin, four of which are novel. We applied an improved lantibiotic expression platform to produce and purify these lantibiotics for antimicrobial assays. We determined their minimal inhibitory concentration (MIC) against both Gram-positive human pathogens and gut commensals and profiled the lantibiotic resistance genes in these pathogens and commensals. Structure-activity relationship (SAR) studies with analogs revealed key regions and residues that impact their antimicrobial properties. Our characterization and SAR studies of nisin-like lantibiotics against both pathogens and human gut commensals could shed light on the future development of lantibiotic-based therapeutics and food preservatives.

Indexed as

BacteriocinsNisinAmino Acid SequenceAnti-Bacterial AgentsHumansAnti-Bacterial AgentsBacteriocinsNisinnisin A

Identifiers

PMID38293740
PMCPMC10877564
OpenAlexW4391401205

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.