Evidence map›Paper›PMID 38292428›Full record

ArticleiScience2024

Dynamic nature of viral and bacterial communities in human faeces.

Andrey N Shkoporov, Orla O'Regan, Linda Smith, Ekaterina V Khokhlova, Lorraine A Draper, R Paul Ross, Colin Hill

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Andrey N ShkoporovAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Orla O'ReganAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Linda SmithAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Ekaterina V KhokhlovaAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Lorraine A DraperAPC Microbiome Ireland, University College Cork, Cork, Ireland.
R Paul RossAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Colin HillAPC Microbiome Ireland, University College Cork, Cork, Ireland.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Bacteriophages are a major component of the gut microbiome and are believed to play a role in establishment and stabilization of microbial communities by influencing taxonomic and functional diversity. We show that the activity of lytic and temperate phages can also significantly affect bacterial community structure in a model of extended colonic retention. Intact fresh human feces were incubated anaerobically at 37°C without homogenization and subjected to metagenomic sequencing. We observed subject-specific blooms and collapses of selected bacteriophage and bacterial populations within some individuals. Most notable were striking collapses of

Indexed as

microbiologymicrobiomevirology

Identifiers

PMID38292428
PMCPMC10825054

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.