Evidence map›Paper›PMID 38291512›Full record

ArticleHuman genomics2024

Association of the C allele of rs479200 in the EGLN1 gene with COVID-19 severity in Indian population: a novel finding.

Renuka Harit, Sajal De, Piyoosh Kumar Singh, Deepika Kashyap, Manish Kumar, Dibakar Sahu, Chander Prakash Yadav, Mradul Mohan, Vineeta Singh, Ram Singh Tomar and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Human genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Renuka HaritICMR-National Institute of Malaria Research, New Delhi, India.
Sajal De *All India Institute of Medical Sciences, Raipur, Chhattisgarh, India.
Piyoosh Kumar Singh *ICMR-National Institute of Malaria Research, New Delhi, India.
Deepika KashyapICMR-National Institute of Malaria Research, New Delhi, India.
Manish KumarICMR-National Institute of Malaria Research, New Delhi, India.
Dibakar SahuAll India Institute of Medical Sciences, Raipur, Chhattisgarh, India.
Chander Prakash YadavAcademy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.
Mradul MohanICMR-National Institute of Malaria Research, New Delhi, India.
Vineeta SinghICMR-National Institute of Malaria Research, New Delhi, India.
Ram Singh TomarICMR-National Institute of Malaria Research, New Delhi, India.
Kailash C PandeyICMR-National Institute of Malaria Research, New Delhi, India. kailash.pandey@icmr.gov.in.
Kapil VashishtICMR-National Institute of Malaria Research, New Delhi, India. vashisht.kapil07@gmail.com.
National Institute of Malaria Research · INAll India Institute of Medical Sciences Raipur · INAcademy of Scientific and Innovative Research · INNational Institute of Cancer Prevention and Research · IN

Funding

ICMR-National Institute of Malaria Research, Delhi, India IntramuralNational Research Foundation of Korea (MSIT) (2018M3A9H5055614)
6 · The paper itself

Abstract

The present study investigated two single nucleotide polymorphisms (SNPs)-rs479200 and rs516651 in the host EGLN1/PHD2 gene for their association with COVID-19 severity. A retrospective cohort of 158 COVID-19 patients from the Indian population (March 2020 to June 2021) was enrolled. Notably, the frequency of C allele (0.664) was twofold higher than T allele (0.336) in severe COVID-19 patients. Here, we report a novel finding that the C allele of rs479200 in the EGLN1 gene imparts a high risk of severe COVID-19 (odds ratio-6.214 (1.84-20.99) p = 0.003; 9.421 (2.019-43.957) p = 0.004), in additive inheritance model (adjusted and unadjusted, respectively).

Indexed as

COVID-19AllelesAsian PeopleGene FrequencyGenetic Predisposition to DiseaseHumansHypoxia-Inducible Factor-Proline DioxygenasesPolymorphism, Single NucleotideRetrospective StudiesEGLN1 protein, humanHypoxia-Inducible Factor-Proline DioxygenasesCOVID-19EGLN1 geneHost genetic factorsHypoxiaRisk factorsrs479200rs516651

Identifiers

PMID38291512
PMCPMC10826260
OpenAlexW4391360300

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.