Evidence map›Paper›PMID 38289137›Full record

ArticleApplied and environmental microbiology2024

Fitness trade-offs of multidrug efflux pumps in

Yangyang Liu, Andrew M Van Horn, Minh T N Pham, Bao Ngoc N Dinh, Rachel Chen, Slaybrina D R Raphael, Alejandro Paulino, Kavya Thaker, Aaryan Somadder, Dominick J Frost and 3 more

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Review
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  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Yangyang Liu *Department of Biology, Kenyon College, Gambier, Ohio, USA.
Andrew M Van Horn *Department of Biology, Kenyon College, Gambier, Ohio, USA.
Minh T N PhamDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Bao Ngoc N DinhDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Rachel ChenDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Slaybrina D R RaphaelDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Alejandro PaulinoDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Kavya ThakerDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Aaryan SomadderDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Dominick J FrostDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Chelsea C MenkeDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Zachary C SlimakDepartment of Biology, Kenyon College, Gambier, Ohio, USA.
Joan L SlonczewskiDepartment of Biology, Kenyon College, Gambier, Ohio, USA.ORCID 0000-0003-3484-1564
Kenyon College · US

Funding

National Science Foundation (NSF) 1923077, 1725426
6 · The paper itself

Abstract

Multidrug efflux pumps are the frontline defense mechanisms of Gram-negative bacteria, yet little is known of their relative fitness trade-offs under gut conditions such as low pH and the presence of antimicrobial food molecules. Low pH contributes to the proton-motive force (PMF) that drives most efflux pumps. We show how the PMF-dependent pumps AcrAB-TolC, MdtEF-TolC, and EmrAB-TolC undergo selection at low pH and in the presence of membrane-permeant phytochemicals. Competition assays were performed by flow cytometry of co-cultured

Indexed as

Escherichia coli K12Escherichia coli ProteinsAnti-Bacterial AgentsEscherichia coliMicrobial Sensitivity TestsSalicylatesAnti-Bacterial AgentsEscherichia coli Proteinsmethyl salicylateSalicylatesAcrAB-TolCCCCPdPCREmrAB-TolCflow cytometrylipophilicity (logP)MdtEF-TolCmultidrug efflux pumpphytochemicalsproton-motive forcerelative fitnesssalicylate

Identifiers

PMID38289137
PMCPMC10880634
OpenAlexW4391361293

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.