Evidence map›Paper›PMID 38287019›Full record

ArticleNature communications2024

A high affinity switch for cAMP in the HCN pacemaker channels.

Alessandro Porro, Andrea Saponaro, Roberta Castelli, Bianca Introini, Anahita Hafez Alkotob, Golnaz Ranjbari, Uta Enke, Jana Kusch, Klaus Benndorf, Bina Santoro and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. GABAExperimental physiology · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Deep Learning-Based Ion Channel Kinetics Analysis for Automated Patch Clamp Recording.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 4 countries.

Alessandro Porro *Department of Biosciences, University of Milan, Milano, Italy.ORCID 0000-0003-4845-6165
Andrea Saponaro *Department of Pharmacological and Biomolecular Sciences, University of Milan, Milano, Italy.
Roberta CastelliDepartment of Biosciences, University of Milan, Milano, Italy.ORCID 0009-0000-6773-7486
Bianca IntroiniDepartment of Biosciences, University of Milan, Milano, Italy.ORCID 0000-0001-8727-1070
Anahita Hafez AlkotobDepartment of Biosciences, University of Milan, Milano, Italy.
Golnaz RanjbariDepartment of Biosciences, University of Milan, Milano, Italy.ORCID 0009-0004-5034-5477
Uta EnkeInstitut für Physiologie II, Universitätsklinikum Jena, Jena, Germany.
Jana KuschInstitut für Physiologie II, Universitätsklinikum Jena, Jena, Germany.ORCID 0000-0001-7206-8133
Klaus BenndorfInstitut für Physiologie II, Universitätsklinikum Jena, Jena, Germany.ORCID 0000-0002-0707-4083
Bina SantoroDepartment of Neuroscience, Zuckerman Institute, Columbia University, New York, NY, USA.
Dario DiFrancescoDepartment of Biosciences, University of Milan, Milano, Italy.ORCID 0000-0002-7322-1790
Gerhard ThielDepartment of Biology, TU-Darmstadt, Darmstadt, Germany.
Anna MoroniDepartment of Biosciences, University of Milan, Milano, Italy. anna.moroni@unimi.it.ORCID 0000-0002-1860-406X
University of Milan · ITJena University Hospital · DEColumbia University · USTechnische Universität Darmstadt · DE

Funding

Structural Studies of HCN Channels in Health and DiseaseR01NS109366 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HENDRICKSON, WAYNE A., SIEGELBAUM, STEVEN A · 2019 to 2023
$2.1M
NINDS NIH HHS R01 NS109366
6 · The paper itself

Abstract

Binding of cAMP to Hyperpolarization activated cyclic nucleotide gated (HCN) channels facilitates pore opening. It is unclear why the isolated cyclic nucleotide binding domain (CNBD) displays in vitro lower affinity for cAMP than the full-length channel in patch experiments. Here we show that HCN are endowed with an affinity switch for cAMP. Alpha helices D and E, downstream of the cyclic nucleotide binding domain (CNBD), bind to and stabilize the holo CNBD in a high affinity state. These helices increase by 30-fold cAMP efficacy and affinity measured in patch clamp and ITC, respectively. We further show that helices D and E regulate affinity by interacting with helix C of the CNBD, similarly to the regulatory protein TRIP8b. Our results uncover an intramolecular mechanism whereby changes in binding affinity, rather than changes in cAMP concentration, can modulate HCN channels, adding another layer to the complex regulation of their activity.

Indexed as

Hyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsIon Channel GatingCyclic Nucleotide-Gated Cation ChannelsNucleotides, CyclicProtein Conformation, alpha-HelicalCyclic Nucleotide-Gated Cation ChannelsHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsNucleotides, Cyclic

Identifiers

PMID38287019
PMCPMC10825183
OpenAlexW4391317867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.