Evidence map›Paper›PMID 38287013›Full record

ArticleNature communications2024

A universal metabolite repair enzyme removes a strong inhibitor of the TCA cycle.

Anthony J Zmuda, Xiaojun Kang, Katie B Wissbroecker, Katrina Freund Saxhaug, Kyle C Costa, Adrian D Hegeman, Thomas D Niehaus

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anthony J Zmuda *Department of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.
Xiaojun Kang *Department of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.
Katie B WissbroeckerDepartment of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.
Katrina Freund SaxhaugDepartment of Horticultural Science, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.
Kyle C CostaDepartment of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.
Adrian D HegemanDepartment of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA.ORCID 0000-0003-1008-6066
Thomas D NiehausDepartment of Plant and Microbial Biology, University of Minnesota, Twin Cities, Saint Paul, MN, 55108, USA. tniehaus@umn.edu.ORCID 0000-0002-3575-8001
University of Minnesota · US

Funding

U.S. Department of Energy (DOE) DE-SC0019148
6 · The paper itself

Abstract

A prevalent side-reaction of succinate dehydrogenase oxidizes malate to enol-oxaloacetate (OAA), a metabolically inactive form of OAA that is a strong inhibitor of succinate dehydrogenase. We purified from cow heart mitochondria an enzyme (OAT1) with OAA tautomerase (OAT) activity that converts enol-OAA to the physiological keto-OAA form, and determined that it belongs to the highly conserved and previously uncharacterized Fumarylacetoacetate_hydrolase_domain-containing protein family. From all three domains of life, heterologously expressed proteins were shown to have strong OAT activity, and ablating the OAT1 homolog caused significant growth defects. In Escherichia coli, expression of succinate dehydrogenase was necessary for OAT1-associated growth defects to occur, and ablating OAT1 caused a significant increase in acetate and other metabolites associated with anaerobic respiration. OAT1 increased the succinate dehydrogenase reaction rate by 35% in in vitro assays with physiological concentrations of both succinate and malate. Our results suggest that OAT1 is a universal metabolite repair enzyme that is required to maximize aerobic respiration efficiency by preventing succinate dehydrogenase inhibition.

Indexed as

MalatesSuccinate DehydrogenaseCitric Acid CycleMalate DehydrogenaseMitochondria, HeartOxaloacetatesOxaloacetic AcidMalate DehydrogenaseMalatesmalic acidOxaloacetatesOxaloacetic AcidSuccinate Dehydrogenase

Identifiers

PMID38287013
PMCPMC10825186
OpenAlexW4391317062

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.