Evidence map›Paper›PMID 38285953›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

Light controls mesophyll-specific post-transcriptional splicing of photoregulatory genes by AtPRMT5.

Yan Yan, Haofei Luo, Yuwei Qin, Tingting Yan, Jinbu Jia, Yifeng Hou, Zhijian Liu, Jixian Zhai, Yanping Long, Xian Deng and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. HPlant cell reports · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Impact of alternative splicing on Arabidopsis proteome.bioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. How does light regulate plant regeneration?Frontiers in plant science · 2024
    Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yan Yan *Key Laboratory of Seed Innovation, State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Haofei Luo *Key Laboratory of Seed Innovation, State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Yuwei Qin *Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.
Tingting YanKey Laboratory of Tropical Fruit Tree Biology of Hainan Province, Institute of Tropical Fruit Trees, Hainan Academy of Agricultural Sciences, Haikou 571100, China.
Jinbu JiaDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.
Yifeng HouKey Laboratory of Seed Innovation, State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Zhijian LiuDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.
Jixian ZhaiDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.ORCID 0000-0002-0217-0666
Yanping LongDepartment of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.
Xian DengKey Laboratory of Seed Innovation, State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Xiaofeng CaoKey Laboratory of Seed Innovation, State Key Laboratory of Plant Genomics and National Center for Plant Gene Research, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Chinese Academy of Sciences · CNSouthern University of Science and Technology · CNHaikou Experimental Station · CN

Funding

China Postdoctoral Science Foundation (China Postdoctoral Foundation Project) 2020M680744MOST | National Natural Science Foundation of China (NSFC) 32100444MOST | National Natural Science Foundation of China (NSFC) 32270631MOST | National Natural Science Foundation of China (NSFC) 32300479Youth Innovation Promotion Association of the Chinese Academy of Sciences (CAS YIPA) Y2022039
6 · The paper itself

Abstract

Light plays a central role in plant growth and development, providing an energy source and governing various aspects of plant morphology. Previous study showed that many polyadenylated full-length RNA molecules within the nucleus contain unspliced introns (post-transcriptionally spliced introns, PTS introns), which may play a role in rapidly responding to changes in environmental signals. However, the mechanism underlying post-transcriptional regulation during initial light exposure of young, etiolated seedlings remains elusive. In this study, we used FLEP-seq2, a Nanopore-based sequencing technique, to analyze nuclear RNAs in

Indexed as

ArabidopsisArabidopsis ProteinsProtein-Arginine N-MethyltransferasesGene Expression Regulation, PlantLightSeedlingsUbiquitin-Protein LigasesArabidopsis ProteinsPRMT5 protein, ArabidopsisProtein-Arginine N-MethyltransferasesUbiquitin-Protein LigasesAtPRMT5COP1mesophyll cellpost-transcriptional splicingsingle-nucleus RNA profiling

Identifiers

PMID38285953
PMCPMC10861865
OpenAlexW4391304209

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.