Evidence map›Paper›PMID 38285522›Full record

ArticleNucleic acid therapeutics2024

Reversible Aptamer Staining, Sorting, and Cleaning of Cells (Clean FACS) with Antidote Oligonucleotide or Nuclease Yields Fully Responsive Cells.

Martin D Requena, Amy Yan, Telmo Llanga, Bruce A Sullenger

Open access · greenAbstract read
In one paragraph

Article in Nucleic acid therapeutics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Martin D RequenaDepartment of Surgery, Duke University, Durham, North Carolina, USA.
Amy YanDepartment of Surgery, Duke University, Durham, North Carolina, USA.
Telmo LlangaDepartment of Surgery, Duke University, Durham, North Carolina, USA.
Bruce A SullengerDepartment of Surgery, Duke University, Durham, North Carolina, USA.ORCID 0000-0002-5113-5541
Duke University · US

Funding

Translating Mechanistic Insights into Intrinsic Xase FunctionP01HL139420 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI Sriram Krishnaswamy · 2018 to 2026
$22.4M
Direct Detection and Characterization of Thrombosis In VivoR01HL147147 · NHLBI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SULLENGER, BRUCE ALAN, TARANTAL, ALICE F · 2019 to 2022
$3.0M
NHLBI NIH HHS P01 HL139420NHLBI NIH HHS R01 HL147147
6 · The paper itself

Abstract

The ability to reverse the binding of aptamers to their target proteins has received considerable attention for developing controllable therapeutic agents. Recently, use of aptamers as reversible cell-sorting ligands has also sparked interest. Antibodies are currently utilized for isolating cells expressing a particular cell surface receptor. The inability to remove antibodies from isolated cells following sorting greatly limits their utility for many applications. Previously, we described how a particular aptamer-antidote oligonucleotide pair can isolate cells and clean them. Here, we demonstrate that this approach is generalizable; aptamers can simultaneously recognize more than one cell type during fluorescent activated cell sorting (FACS). Moreover, we describe a novel approach to reverse aptamer binding following cell sorting using a nuclease. This alternative strategy represents a cleaning approach that does not require the generation of antidote oligonucleotides for each aptamer and will greatly reduce the cost and expand the utility of Clean FACS.

Indexed as

AntidotesAptamers, NucleotideAntibodiesLigandsSELEX Aptamer TechniqueStaining and LabelingAntibodiesAntidotesAptamers, NucleotideLigandsaptamercell surface receptorcell therapyfluorescence-activated cell sorting (FACS)nuclease

Identifiers

PMID38285522
PMCPMC11302193
OpenAlexW4391310551

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.