Evidence map›Paper›PMID 38284990›Full record

ArticleThe Journal of experimental medicine2024

EML4-ALK fusions drive lung adeno-to-squamous transition through JAK-STAT activation.

Zhen Qin, Meiting Yue, Shijie Tang, Fengying Wu, Honghua Sun, Yuan Li, Yongchang Zhang, Hiroki Izumi, Hsinyi Huang, Wanying Wang and 23 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. EML4-ALK fusion rewires transcriptomic, miRNA, and CAF-associated programs in non-small cell lung cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
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  8. International journal of biological sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 12 institutions in 3 countries.

Zhen Qin *State Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0009-0000-9959-9137
Meiting Yue *State Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0009-0001-1793-5764
Shijie Tang *State Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-8022-0374
Fengying Wu *Department of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.ORCID 0000-0001-5129-0528
Honghua Sun *State Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0001-9833-8314
Yuan LiDepartment of Thoracic Surgery, Fudan University Shanghai Cancer Center, Shanghai, China.ORCID 0000-0001-5651-819X
Yongchang ZhangDepartment of Medical Oncology, Hunan Cancer Hospital, Central South University, Changsha, China.ORCID 0000-0002-6829-7176
Hiroki IzumiDepartment of Thoracic Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0002-9566-4859
Hsinyi HuangLaura and Isaac Perlmutter Cancer Center, New York University Grossman School of Medicine, New York University Langone Health , New York, NY, USA.ORCID 0000-0003-1217-4131
Wanying WangDepartment of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.ORCID 0000-0002-2901-4532
Yun XueState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-0619-9319
Xinyuan TongState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0001-8970-1775
Shunta MoriDepartment of Thoracic Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0003-2511-8390
Tetsuro TakiDepartment of Thoracic Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0001-8654-6896
Koichi GotoDepartment of Thoracic Oncology, National Cancer Center Hospital East, Kashiwa, Japan.ORCID 0000-0002-3023-2510
Yujuan JinState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-8748-7063
Fei LiDepartment of Oncology, Shanghai Medical College, Fudan University, Shanghai, China.ORCID 0000-0002-1973-6611
Fu-Ming LiShanghai Key Laboratory of Metabolic Remodeling and Health, Institute of Metabolism and Integrative Biology, Fudan University , Shanghai, China.ORCID 0000-0002-2603-1548
Yijun GaoState Key Laboratory of Oncology in South China, Sun Yat-sen University Cancer Center , Guangzhou, China.ORCID 0000-0003-4978-3205
Zhaoyuan FangUniversity of Edinburgh Institute, Zhejiang University , Haining, China.ORCID 0000-0002-0393-2052
Yisheng FangDepartment of Oncology, Nanfang Hospital, Southern Medical University, Guangzhou, China.ORCID 0009-0008-7755-8180
Liang HuState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-0984-9807
Xiumin YanMinistry of Education-Shanghai Key Laboratory of Children's Environmental Health, Institute of Early Life Health, Xinhua Hospital, Shanghai Jiao Tong University School of Medicine , Shanghai, China.ORCID 0000-0002-3260-1690
Guoliang XuState Key Laboratory of Molecular Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-3240-3141
Haiquan ChenDepartment of Thoracic Surgery, Fudan University Shanghai Cancer Center, Shanghai, China.ORCID 0000-0001-7846-257X
Susumu S KobayashiDivision of Translational Genomics, Exploratory Oncology Research and Clinical Trial Center, National Cancer Center, Kashiwa, Japan.ORCID 0000-0003-2262-4001
Andrea VenturaCancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID 0000-0003-4320-9907
Kwok-Kin WongLaura and Isaac Perlmutter Cancer Center, New York University Grossman School of Medicine, New York University Langone Health , New York, NY, USA.ORCID 0000-0001-6323-235X
Xueliang ZhuState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0001-8019-9336
Liang ChenMinistry of Education Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, Jinan University , Guangzhou, China.ORCID 0000-0001-7300-6604
Shengxiang RenDepartment of Medical Oncology, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai, China.ORCID 0000-0001-8767-9850
Luo-Nan ChenState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0002-3960-0068
Hongbin JiState Key Laboratory of Cell Biology, Shanghai Institute of Biochemistry and Cell Biology, Center for Excellence in Molecular Cell Science, Chinese Academy of Sciences , Shanghai, China.ORCID 0000-0003-0891-6390
Chinese Academy of Sciences · CNNational Cancer Center Hospital East · JPShanghai Medical College of Fudan University · CNTongji University · CNJinan University · CNNew York University · USCentral South University · CNMemorial Sloan Kettering Cancer Center · USNanfang Hospital · CNShanghai Jiao Tong University · CNSun Yat-sen University · CNZhejiang University-University of Edinburgh Institute · CN

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Chinese Academy of Science ZDBS-LY-SM006Innovative Research Team of High-level Local Universities in Shanghai ZLCX20180500National Key Research and Development Program of China 2022YFA1103900National Natural Science Foundation of China 82303039NCI NIH HHS P30 CA008748Science and Technology Commission of Shanghai Municipality 23YF1452900
6 · The paper itself

Abstract

Human lung adenosquamous cell carcinoma (LUAS), containing both adenomatous and squamous pathologies, exhibits strong cancer plasticity. We find that ALK rearrangement is detectable in 5.1-7.5% of human LUAS, and transgenic expression of EML4-ALK drives lung adenocarcinoma (LUAD) formation initially and squamous transition at late stage. We identify club cells as the main cell-of-origin for squamous transition. Through recapitulating lineage transition in organoid system, we identify JAK-STAT signaling, activated by EML4-ALK phase separation, significantly promotes squamous transition. Integrative study with scRNA-seq and immunostaining identify a plastic cell subpopulation in ALK-rearranged human LUAD showing squamous biomarker expression. Moreover, those relapsed ALK-rearranged LUAD show notable upregulation of squamous biomarkers. Consistently, mouse squamous tumors or LUAD with squamous signature display certain resistance to ALK inhibitor, which can be overcome by combined JAK1/2 inhibitor treatment. This study uncovers strong plasticity of ALK-rearranged tumors in orchestrating phenotypic transition and drug resistance and proposes a potentially effective therapeutic strategy.

Indexed as

Adenocarcinoma of LungCarcinoma, Squamous CellLung NeoplasmsAnimalsHumansLungMiceOncogene Proteins, FusionReceptor Protein-Tyrosine KinasesEML4-ALK fusion protein, humanOncogene Proteins, FusionReceptor Protein-Tyrosine Kinases

Identifiers

PMID38284990
PMCPMC10824105
OpenAlexW4391314545

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.