Evidence map›Paper›PMID 38284094›Full record

ArticleACS omega2024

Low-High-Low Rotationally Pulse-Actuated Serial Dissolvable Film Valves Applied to Solid Phase Extraction and LAMP Isothermal Amplification for Plant Pathogen Detection on a Lab-on-a-Disc.

Lourdes An Julius, Muhammad Mubashar Saeed, Tim Kuijpers, Sergei Sandu, Grace Henihan, Tanja Dreo, Cor D Schoen, Rohit Mishra, Nicholas J Dunne, Eadaoin Carthy and 2 more

Abstract read
In one paragraph

Article in ACS omega, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. CRISPR/Cas12a-Based One-Tube RT-RAA Assay for PoRV Genotyping.International journal of molecular sciences · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Lourdes An JuliusFraunhofer Project Centre at Dublin City University, Dublin City University, Glasnevin D09 V209, Dublin, Ireland.
Muhammad Mubashar SaeedBiodesign Europe, Dublin City University, Dublin D09 V209, Ireland.
Tim KuijpersBiodesign Europe, Dublin City University, Dublin D09 V209, Ireland.
Sergei SanduBiodesign Europe, Dublin City University, Dublin D09 V209, Ireland.
Grace HenihanFraunhofer Project Centre at Dublin City University, Dublin City University, Glasnevin D09 V209, Dublin, Ireland.
Tanja DreoNational Institute of Biology, 1000 Ljubljana, Slovenia.
Cor D SchoenWageningen University and Research, 6708 PB Wageningen, The Netherlands.
Rohit MishraFraunhofer Project Centre at Dublin City University, Dublin City University, Glasnevin D09 V209, Dublin, Ireland.ORCID https://orcid.org/0000-0003-4279-4163
Nicholas J DunneBiodesign Europe, Dublin City University, Dublin D09 V209, Ireland.
Eadaoin CarthyNational Centre for Sensor Research (NCSR), Dublin City University, Dublin D09 V209, Ireland.
Jens DucréeSchool of Physical Sciences, Dublin City University, Dublin D09 V209, Ireland.
David J KinahanNational Centre for Sensor Research (NCSR), Dublin City University, Dublin D09 V209, Ireland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ability of the centrifugal Lab-on-a-Disc (LoaD) platform to closely mimic the "on bench" liquid handling steps (laboratory unit operations (LUOs)) such as metering, mixing, and aliquoting supports on-disc automation of bioassay without the need for extensive biological optimization. Thus, well-established bioassays, normally conducted manually using pipettes or using liquid handling robots, can be relatively easily automated in self-contained microfluidic chips suitable for use in point-of-care or point-of-use settings. The LoaD's ease of automation is largely dependent on valves that can control liquid movement on the rotating disc. The optimum valving strategy for a true low-cost and portable device is rotationally actuated valves, which are actuated by changes in the disc spin-speed. However, due to tolerances in disc manufacturing and variations in reagent properties, most of these valving technologies have inherent variation in their actuation spin-speed. Most valves are actuated through stepped increases in disc spin-speed until the motor reaches its maximum speed (rarely more than 6000 rpm). These manufacturing tolerances combined with this "analogue" mechanism of valve actuation limits the number of LUOs that can be placed on-disc. In this work, we present a novel valving mechanism called low-high-low serial dissolvable film (DF) valves. In these valves, a DF membrane is placed in a dead-end pneumatic chamber. Below an actuation spin-speed, the trapped air prevents liquid wetting and dissolving the membrane. Above this spin-speed, the liquid will enter and wet the DF and open the valve. However, as DFs take ∼40 s to dissolve, the membrane can be wetted, and the disc spin-speed reduced before the film opens. Thus, by placing valves in a series, we can govern on which "digital pulse" in spin-speeding a reagent is released; a reservoir with one serial valve will open on the first pulse, a reservoir with two serial valves on the second, and so on. This "digital" flow control mechanism allows the automation of complex assays with high reliability. In this work, we first describe the operation of the valves, outline the theoretical basis for their operation, and support this analysis with an experiment. Next, we demonstrate how these valves can be used to automate the solid-phase extraction of DNA on on-disc LAMP amplification for applications in plant pathogen detection. The disc was successfully used to extract and detect, from a sample lysed off-disc, DNA indicating the presence of thermally inactivated

Identifiers

PMID38284094
PMCPMC10809376

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.