Evidence map›Paper›PMID 38283086›Full record

ArticleThe journal of allergy and clinical immunology. Global2024

Exploring gastric cancer genetics: A turning point in common variable immunodeficiency.

Silvia Sánchez-Ramón, Jesús Fuentes-Antrás, Nicholas L Rider, Pedro Pérez-Segura, Eduardo de la Fuente-Muñoz, Miguel Fernández-Arquero, Esmeralda Neves, Rebeca Pérez de Diego, Alberto Ocaña, Kissy Guevara-Hoyer

Abstract read
In one paragraph

Article in The journal of allergy and clinical immunology. Global, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Silvia Sánchez-RamónCancer Immunomonitoring and Immune-Mediated Diseases Research Unit, San Carlos Health Research Institute (IdSSC), Department of Clinical Immunology, San Carlos University Hospital, Madrid, Spain.
Jesús Fuentes-AntrásDepartment of Medical Oncology, IdSSC, San Carlos University Hospital, Madrid, Spain.
Nicholas L RiderDivision of Clinical Informatics, Pediatrics, Allergy and Immunology, Liberty University College of Osteopathic Medicine and Collaborative Health Partners, Lynchburg, Va.
Pedro Pérez-SeguraDepartment of Medical Oncology, IdSSC, San Carlos University Hospital, Madrid, Spain.
Eduardo de la Fuente-MuñozCancer Immunomonitoring and Immune-Mediated Diseases Research Unit, San Carlos Health Research Institute (IdSSC), Department of Clinical Immunology, San Carlos University Hospital, Madrid, Spain.
Miguel Fernández-ArqueroCancer Immunomonitoring and Immune-Mediated Diseases Research Unit, San Carlos Health Research Institute (IdSSC), Department of Clinical Immunology, San Carlos University Hospital, Madrid, Spain.
Esmeralda NevesDepartment of Immunology, Centro Hospitalar e Universitário de Santo António, Porto, Portugal.
Rebeca Pérez de DiegoDepartment of Immunology, Ophthalmology and ENT, School of Medicine, Universidad Complutense, Madrid, Spain.
Alberto OcañaDepartment of Medical Oncology, IdSSC, San Carlos University Hospital, Madrid, Spain.
Kissy Guevara-HoyerCancer Immunomonitoring and Immune-Mediated Diseases Research Unit, San Carlos Health Research Institute (IdSSC), Department of Clinical Immunology, San Carlos University Hospital, Madrid, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Gastric cancer (GC) stands as a prominent cause of cancer-related mortality and ranks second among the most frequently diagnosed malignancies in individuals with common variable immunodeficiency (CVID). Objective: We sought to conduct a comprehensive, large-scale genetic analysis to explore the CVID-associated germline variant landscape within gastric adenocarcinoma samples and to seek to delineate the transcriptomic similarities between GC and CVID. Methods: We investigated the presence of CVID-associated germline variants in 1591 GC samples and assessed their impact on tumor mutational load. The progression of GC was evaluated in patients with and without these variants. Transcriptomic similarities were explored by matching differentially expressed genes in GC to healthy gastric tissue with a CVID transcriptomic signature. Results: CVID-associated germline variants were found in 60% of GC samples. Our analysis revealed a significant association between the presence of CVID-related genetic variants and higher tumor mutational load in GC ( Conclusions: Our findings contribute to a deeper understanding of potential molecular modulators of GC and shed light on the intricate interplay between immunodeficiency and cancer. This study underscores the clinical relevance of CVID-related variants in influencing GC progression and opens avenues for further exploration into novel therapeutic approaches.

Indexed as

common variable immunodeficiencyCVIDGastric cancergermline variantssomatic mutation

Identifiers

PMID38283086
PMCPMC10818086

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.