Evidence map›Paper›PMID 38281915›Full record

ArticleBMC plant biology2024

Genome-wide identification and characterization of NBLRR genes in finger millet (Eleusine coracana L.) and their expression in response to Magnaporthe grisea infection.

Alexander Balamurugan, Mallana Gowdra Mallikarjuna, Shilpi Bansal, S Chandra Nayaka, Hosahatti Rajashekara, Tara Satyavathi Chellapilla, Ganesan Prakash

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 1 country.

Alexander BalamuruganDivision of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
Mallana Gowdra MallikarjunaDivision of Genetics, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. MG.Mallikarjuna@icar.gov.in.ORCID http://orcid.org/0000-0003-4565-9792
Shilpi BansalDivision of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.
S Chandra NayakaDepartment of Studies in Applied Botany and Biotechnology, University of Mysore, Mysore, 570005, India.
Hosahatti RajashekaraICAR-Vivekananda Institute of Hill Agriculture, Almora, Uttarakhand, 263601, India.
Tara Satyavathi ChellapillaICAR-Indian Institute of Millets Research, Rajendranagar, Hyderabad, Telangana, 500 030, India.
Ganesan PrakashDivision of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India. g.prakash@icar.gov.in.ORCID http://orcid.org/0000-0003-1740-8427
Indian Agricultural Statistics Research Institute · INIndian Agricultural Research Institute · INIndian Institute of Millets Research · INSRM Institute of Science and Technology · INUniversity of Mysore · INVivekananda Parvatiya Krishi Anusandhan Sansthan · IN

Funding

Department of Biotechnology, Ministry of Science and Technology, India BT/PR32125/AGIIl/103/1147/2019Indian Council of Agricultural Research ICAR-G/CRP-Genomics/2015-2720/IARI-12-151
6 · The paper itself

Abstract

backgroundThe nucleotide binding site leucine rich repeat (NBLRR) genes significantly regulate defences against phytopathogens in plants. The genome-wide identification and analysis of NBLRR genes have been performed in several species. However, the detailed evolution, structure, expression of NBLRRs and functional response to Magnaporthe grisea are unknown in finger millet (Eleusine coracana (L.) Gaertn.).

resultsThe genome-wide scanning of the finger millet genome resulted in 116 NBLRR (EcNBLRRs1-116) encompassing 64 CC-NB-LRR, 47 NB-LRR and 5 CC

conclusionThe identification and expression analysis of EcNBLRRs showed the role of EcNBLRR genes in assigning blast resistance in finger millet. These results pave the foundation for in-depth and targeted functional analysis of EcNBLRRs through genome editing and transgenic approaches.

Indexed as

EleusineBinding SitesGenotypeNucleotidesPhylogenyPyricularia griseaNucleotidesBlast, evolutionExpression analysisFinger milletMagnaporthe GriseaNBLRR

Identifiers

PMID38281915
PMCPMC10823742
OpenAlexW4391296214

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.