Evidence map›Paper›PMID 38280985›Full record

ArticleBMC genomics2024

Genome-wide identification and expression characterization of the GH3 gene family of tea plant (Camellia sinensis).

Xinge Wang, Chunyu Jia, Lishuang An, Jiangyan Zeng, Aixia Ren, Xin Han, Yiqing Wang, Shuang Wu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Characterization and evolution of theFrontiers in plant science · 2026
    Article
  3. Article
  4. International journal of molecular sciences · 2024
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Xinge WangSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Chunyu JiaSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Lishuang AnSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Jiangyan ZengSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Aixia RenSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Xin HanSchool of Life Science and Agriculture, Qiannan Normal University for Nationalities, Duyun, Guizhou, 558000, China.
Yiqing WangKey Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang, Guizhou, 550025, China. wangty0912@163.com.
Shuang WuKey Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang, Guizhou, 550025, China. 1141777014@qq.com.
Qiannan Normal College For Nationalities · CNGuizhou University · CN

Funding

The Education Quality Improvement Project of Qiannan Normal University for Nationalities 2021xjg018, 2022xjg038The High-level Talent Research Project of Qiannan Normal University for Nationalities 2021qnsyrc07The Innovation and Entrepreneurship Training Program for College Students of Guizhou Province S202210670020, S202210670028The Science and Technology Project of Qiannan Science and Technology Bureau 2022qnkh09
6 · The paper itself

Abstract

To comprehensively understand the characteristics of the GH3 gene family in tea plants (Camellia sinensis), we identified 17 CsGH3 genes and analyzed their physicochemical properties, phylogenetic relationships, gene structures, promoters, and expression patterns in different tissues. The study showed that the 17 CsGH3 genes are distributed on 9 chromosomes, and based on evolutionary analysis, the CsGH3 members were divided into three subgroups. Gene duplication analysis revealed that segmental duplications have a significant impact on the amplification of CsGH3 genes. In addition, we identified and classified cis-elements in the CsGH3 gene promoters and detected elements related to plant hormone responses and non-biotic stress responses. Through expression pattern analysis, we observed tissue-specific expression of CsGH3.3 and CsGH3.10 in flower buds and roots. Moreover, based on predictive analysis of upstream regulatory transcription factors of CsGH3, we identified the potential transcriptional regulatory role of gibberellin response factor CsDELLA in CsGH3.14 and CsGH3.15. In this study, we found that CsGH3 genes are involved in a wide range of activities, such as growth and development, stress response, and transcription. This is the first report on CsGH3 genes and their potential roles in tea plants. In conclusion, these results provide a theoretical basis for elucidating the role of GH3 genes in the development of perennial woody plants and offer new insights into the synergistic effects of multiple hormones on plant growth and development in tea plants.

Indexed as

Camellia sinensisGene Expression Regulation, PlantPhylogenyPlant Growth RegulatorsPlant ProteinsPromoter Regions, GeneticTeaPlant Growth RegulatorsPlant ProteinsTeaCamellia sinensisGene expression analysisGenome-wide identificationGH3 gene familyTranscriptional regulation

Identifiers

PMID38280985
PMCPMC10822178
OpenAlexW4391276721

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.