Evidence map›Paper›PMID 38278869›Full record

ArticleEuropean journal of human genetics : EJHG2024

Towards solving the genetic diagnosis odyssey in Iranian patients with congenital anomalies.

Parisa Vaseghi, Laleh Habibi, Julie A Neidich, Yang Cao, Neda Fattahi, Ramin Rashidi-Nezhad, Tayebeh Salehnezhad, Hossein Dalili, Fatemeh Rahimi Sharbaf, Mohammad Reza Zarkesh and 20 more

Open access · greenAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Identification of a putative founder effect involving the HACE1:c.1396C>T variant in two Iranian families and review of reported cases.Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology · 2026
    Review
  3. Optimizing genetic testing strategies for congenital anomalies in Iran.European journal of human genetics : EJHG · 2024
    Article
  4. Genomic testing in Low- and Middle-Income Countries (LMIC).European journal of human genetics : EJHG · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 5 institutions in 2 countries.

Parisa VaseghiDepartment of Medical Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Laleh Habibi *Ronash Medical Genetics Laboratory, Tehran, Iran.
Julie A Neidich *Department of Pathology & Immunology, Division of Laboratory & Genomic Medicine, Washington University School of Medicine, St. Louis, MO, USA.
Yang Cao *Department of Pathology & Immunology, Division of Laboratory & Genomic Medicine, Washington University School of Medicine, St. Louis, MO, USA.
Neda FattahiRonash Medical Genetics Laboratory, Tehran, Iran.
Ramin Rashidi-NezhadRonash Medical Genetics Laboratory, Tehran, Iran.
Tayebeh SalehnezhadRonash Medical Genetics Laboratory, Tehran, Iran.
Hossein DaliliBreastfeeding Research Center, Family Health Research Institute, Tehran University of Medical Sciences, Tehran, Iran.
Fatemeh Rahimi SharbafDepartment of Obstetrics and Gynecology, School of Medicine, Yas Hospital Complex, Tehran University of Medical Sciences, Tehran, Iran.
Mohammad Reza ZarkeshDepartment of Neonatology, Yas Hospital Complex, Tehran university of medical sciences, Tehran, Iran.
Mahtash MalekianRonash Medical Genetics Laboratory, Tehran, Iran.
Mahdieh MokhberdezfuliRonash Medical Genetics Laboratory, Tehran, Iran.ORCID 0000-0002-3681-0115
Amirhosein MehrtashRonash Medical Genetics Laboratory, Tehran, Iran.
Amin ArdeshirdavaniCimorgh Medical IT Solutions, Tehran, Iran.ORCID 0000-0002-7226-7324
Roxana KariminejadKariminejad-Najmabadi Pathology and Genetics Center, Tehran, Iran.
Vafa GhorbansabaghDepartment of Pediatrics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Parvane SadeghimoghadamDepartment of Pediatrics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Amir NaddafDepartment of Pediatrics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Tahereh Esmaeilnia ShirvanyDepartment of Pediatrics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Ziba MosayebiDepartment of Pediatrics, Faculty of Medicine, Tehran University of Medical Sciences, Tehran, Iran.
Behrokh SahebdelDepartment of Obstetrics and Gynecology, School of Medicine, Yas Hospital Complex, Tehran University of Medical Sciences, Tehran, Iran.
Fatemeh GolshahiDepartment of Obstetrics and Gynecology, School of Medicine, Yas Hospital Complex, Tehran University of Medical Sciences, Tehran, Iran.
Mahboobeh ShiraziDepartment of Obstetrics and Gynecology, School of Medicine, Yas Hospital Complex, Tehran University of Medical Sciences, Tehran, Iran.
Shirin ShamelDepartment of Neonatology, Yas Hospital Complex, Tehran university of medical sciences, Tehran, Iran.
Roksana MoeiniDepartment of Neonatology, Yas Hospital Complex, Tehran university of medical sciences, Tehran, Iran.ORCID 0000-0002-0062-4273
Abolfazl HeidariSana Medical Genetics Laboratory, Ghazvin, Iran.
Mohammad Ali DaneshmandFormer teacher of Pathology, Arak Medical University, Arak, Iran.ORCID 0000-0003-0142-1301
Reza GhasemiDepartment of Pathology & Immunology, Division of Laboratory & Genomic Medicine, Washington University School of Medicine, St. Louis, MO, USA.
Seyed Mohammad AkramiDepartment of Medical Genetics, School of Medicine, Tehran University of Medical Sciences, Tehran, Iran. akramism@tums.ac.ir.ORCID 0000-0003-0169-0202
Ali Rashidi-NezhadMaternal, Fetal and Neonatal Research Center, Family Health Research Institute, Tehran University of Medical Sciences, Tehran, Iran. arashidinezhad@tums.ac.ir.ORCID 0000-0002-7200-7901
Tehran University of Medical Sciences · IRWashington University in St. Louis · USAcademic Center for Education, Culture and Research · IRArak University of Medical Sciences · IRIran University of Medical Sciences · IR

Funding

Tehran University of Medical Sciences and Health Services (TUMS) 52355Tehran University of Medical Sciences and Health Services (TUMS) 52367
6 · The paper itself

Abstract

Understanding the underlying causes of congenital anomalies (CAs) can be a complex diagnostic journey. We aimed to assess the efficiency of exome sequencing (ES) and chromosomal microarray analysis (CMA) in patients with CAs among a population with a high fraction of consanguineous marriage. Depending on the patient's symptoms and family history, karyotype/Quantitative Fluorescence- Polymerase Chain Reaction (QF-PCR) (n = 84), CMA (n = 81), ES (n = 79) or combined CMA and ES (n = 24) were performed on 168 probands (66 prenatal and 102 postnatal) with CAs. Twelve (14.28%) probands were diagnosed by karyotype/QF-PCR and seven (8.64%) others were diagnosed by CMA. ES findings were conclusive in 39 (49.36%) families, and 61.90% of them were novel variants. Also, 64.28% of these variants were identified in genes that follow recessive inheritance in CAs. The diagnostic rate (DR) of ES was significantly higher than that of CMA in children from consanguineous families (P = 0·0001). The highest DR by CMA was obtained in the non-consanguineous postnatal subgroup and by ES in the consanguineous prenatal subgroup. In a population that is highly consanguineous, our results suggest that ES may have a higher diagnostic yield than CMA and should be considered as the first-tier test in the evaluation of patients with congenital anomalies.

Indexed as

Congenital AbnormalitiesConsanguinityGenetic TestingChildChild, PreschoolExome SequencingFemaleHumansInfantInfant, NewbornIranMalePrenatal Diagnosis

Identifiers

PMID38278869
PMCPMC11499880
OpenAlexW4391260590

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.