Evidence map›Paper›PMID 38275767›Full record

ReviewBiomolecules2024

Deciphering the Calcium Code: A Review of Calcium Activity Analysis Methods Employed to Identify Meaningful Activity in Early Neural Development.

Sudip Paudel, Michelle Yue, Rithvik Nalamalapu, Margaret S Saha

Open access · goldAbstract readReview
In one paragraph

Review in Biomolecules, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Sudip PaudelWyss Institute, Harvard University, Boston, MA 02215, USA.ORCID 0000-0003-4502-8405
Michelle YueWyss Institute, Harvard University, Boston, MA 02215, USA.ORCID 0009-0000-9114-7902
Rithvik NalamalapuSchool of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.ORCID 0000-0002-2507-8117
Margaret S SahaBiology Department|William & Mary, Williamsburg, VA 23185, USA.ORCID 0000-0003-0096-2667
Harvard University · USVirginia Commonwealth University · USWilliam & Mary · US

Funding

Molecular Analysis of Tweety Family Genes in Development and Tissue HomeostasisR15HD114135 · NICHD · COLLEGE OF WILLIAM AND MARY · PI SAHA, MARGARET S · 2023 to 2023
$452k
Plasticity and Regulation in Xenopus Anterior-Posterior PatterningR15HD077624 · NICHD · COLLEGE OF WILLIAM AND MARY · PI SAHA, MARGARET S · 2013 to 2013
$368k
NICHD NIH HHS R15 HD077624NICHD NIH HHS R15 HD114135NIH HHS 1 R15 HD077624-01; 1R15HD114135-01
6 · The paper itself

Abstract

The intracellular and intercellular flux of calcium ions represents an ancient and universal mode of signaling that regulates an extensive array of cellular processes. Evidence for the central role of calcium signaling includes various techniques that allow the visualization of calcium activity in living cells. While extensively investigated in mature cells, calcium activity is equally important in developing cells, particularly the embryonic nervous system where it has been implicated in a wide variety array of determinative events. However, unlike in mature cells, where the calcium dynamics display regular, predictable patterns, calcium activity in developing systems is far more sporadic, irregular, and diverse. This renders the ability to assess calcium activity in a consistent manner extremely challenging, challenges reflected in the diversity of methods employed to analyze calcium activity in neural development. Here we review the wide array of calcium detection and analysis methods used across studies, limiting the extent to which they can be comparatively analyzed. The goal is to provide investigators not only with an overview of calcium activity analysis techniques currently available, but also to offer suggestions for future work and standardization to enable informative comparative evaluations of this fundamental and important process in neural development.

Indexed as

CalciumNeuronsNeurogenesisSignal TransductionCalciumcalciumdevelopmentembryoneuralreviewspikes

Identifiers

PMID38275767
PMCPMC10813340
OpenAlexW4391098812

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.