Evidence map›Paper›PMID 38275635›Full record

ArticleAntioxidants (Basel, Switzerland)2023

Distinct or Overlapping Areas of Mitochondrial Thioredoxin 2 May Be Used for Its Covalent and Strong Non-Covalent Interactions with Protein Ligands.

Charalampos Ntallis, Haralampos Tzoupis, Theodore Tselios, Christos T Chasapis, Alexios Vlamis-Gardikas

Open access · goldAbstract read
In one paragraph

Article in Antioxidants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 67% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Charalampos NtallisDepartment of Chemistry, University of Patras, 26504 Rion, Greece.ORCID 0000-0002-4189-5803
Haralampos TzoupisDepartment of Chemistry, University of Patras, 26504 Rion, Greece.ORCID 0000-0002-1534-2762
Theodore TseliosDepartment of Chemistry, University of Patras, 26504 Rion, Greece.ORCID 0000-0002-1310-0591
Christos T ChasapisInstitute of Chemical Biology, National Hellenic Research Foundation, Vas. Constantinou 48, 11635 Athens, Greece.ORCID 0000-0002-8728-6245
Alexios Vlamis-GardikasDepartment of Chemistry, University of Patras, 26504 Rion, Greece.ORCID 0000-0001-5068-6459
University of Patras · GRNational Hellenic Research Foundation · GR

Funding

Hellenic Foundation for Research and Innovation 3352
6 · The paper itself

Abstract

In silico approaches were employed to examine the characteristics of interactions between human mitochondrial thioredoxin 2 (HsTrx2) and its 38 previously identified mitochondrial protein ligands. All interactions appeared driven mainly by electrostatic forces. The statistically significant residues of HsTrx2 for interactions were characterized as "contact hot spots". Since these were identical/adjacent to putative thermodynamic hot spots, an energy network approach identified their neighbors to highlight possible contact interfaces. Three distinct areas for binding emerged: (i) one around the active site for covalent interactions, (ii) another antipodal to the active site for strong non-covalent interactions, and (iii) a third area involved in both kinds of interactions. The contact interfaces of HsTrx2 were projected as respective interfaces for

Indexed as

contact areahot spotsinterfacemitochondriamolecular recognitionthioredoxin

Identifiers

PMID38275635
PMCPMC10812433
OpenAlexW4390013960

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.