Evidence map›Paper›PMID 38274737›Full record

ArticleFrontiers in cellular and infection microbiology2023

DNA damage response coregulator

Deborah Cook, Mollee D Flannigan, Julia H Chariker, Janelle M Hare

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Deborah CookDepartment of Biology and Chemistry, Morehead State University, Morehead, KY, United States.
Mollee D FlanniganDepartment of Biology and Chemistry, Morehead State University, Morehead, KY, United States.
Julia H CharikerKentucky IDeA Networks of Biomedical Research Excellence (KY INBRE) Bioinformatics Core, University of Louisville, Louisville, KY, United States.
Janelle M HareDepartment of Biology and Chemistry, Morehead State University, Morehead, KY, United States.
Morehead State University · USUniversity of Louisville · US

Funding

WKU Lead Faculty AwardP20GM103436 · NIGMS · UNIVERSITY OF LOUISVILLE · PI ERIC C ROUCHKA · 2012 to 2026
$60.1M
Mechanisms of Action of UmuD in Regulating DNA Damage-Induced Genes in a umuC- Deficient mutantR15GM085722 · NIGMS · MOREHEAD STATE UNIVERSITY · PI Janelle M Hare · 2009 to 2026
$1.8M
NIGMS NIH HHS P20 GM103436NIGMS NIH HHS R15 GM085722
6 · The paper itself

Abstract

Introduction: Methods: For this project, we combined our earlier single-end read RNAseq data with the Results: New DESeq2 analyses verified previous differentially expressed genes (DEGs) but also found 339 genes in 17978 JH that were not annotated or physically present in the older genome assembly. Sixty-three were differentially expressed after DNA damage, and 182 had differential basal expression when comparing Discussion: The

Indexed as

Acinetobacter baumanniiBacterial ProteinsDNA DamageDNA RepairTranscriptomeBacterial ProteinsAcinetobacter baumanniiddrRDNA damage responsepathway analysisRNAseq

Identifiers

PMID38274737
PMCPMC10808703
OpenAlexW4390806767

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.