Evidence map›Paper›PMID 38271624›Full record

ArticleGlycobiology2024

Exploring a novel β-1,3-glucanosyltransglycosylase, MlGH17B, from a marine Muricauda lutaonensis strain for modification of laminari-oligosaccharides.

Leila Allahgholi, Maik G N Derks, Justyna M Dobruchowska, Andrius Jasilionis, Antoine Moenaert, Léonie Jouy, Kazi Zubaida Gulshan Ara, Javier A Linares-Pastén, Ólafur H Friðjónsson, Guðmundur Óli Hreggviðsson and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Glycobiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Characterization of a GH17 laminarinase,Applied and environmental microbiology · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Leila AllahgholiDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.ORCID 0000-0003-2969-255X
Maik G N DerksDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.
Justyna M DobruchowskaDepartment of Chemical Biology and Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Bijvoet Center for Biomolecular Research, Utrecht University, Universiteitsweg 99, Utrecht 3584 CG, The Netherlands.
Andrius JasilionisDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.
Antoine MoenaertDepartment of Biotechnology and Biomedicine, Matís ohf, Vínlandsleið 12, Reykjavík IS-113, Iceland.ORCID 0000-0003-1819-8740
Léonie JouyDepartment of Biotechnology and Biomedicine, Matís ohf, Vínlandsleið 12, Reykjavík IS-113, Iceland.
Kazi Zubaida Gulshan AraDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.ORCID 0000-0003-0929-8045
Javier A Linares-PasténDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.
Ólafur H FriðjónssonDepartment of Biotechnology and Biomedicine, Matís ohf, Vínlandsleið 12, Reykjavík IS-113, Iceland.
Guðmundur Óli HreggviðssonDepartment of Biotechnology and Biomedicine, Matís ohf, Vínlandsleið 12, Reykjavík IS-113, Iceland.
Eva Nordberg KarlssonDivision of Biotechnology, Department of Chemistry, Lund University, PO Box 124, Lund SE-221 00, Sweden.ORCID 0000-0002-8597-7050
Lund University · SEMatís (Iceland) · ISUniversity of Iceland · ISUtrecht University · NL

Funding

ERA-NET Cofund BlueBio MariKatEuropean Union's Horizon Europe 101060379Swedish Research Council Formas 2019-02359
6 · The paper itself

Abstract

The marine environment, contains plentiful renewable resources, e.g. macroalgae with unique polysaccharides, motivating search for enzymes from marine microorganisms to explore conversion possibilities of the polysaccharides. In this study, the first GH17 glucanosyltransglycosylase, MlGH17B, from a marine bacterium (Muricauda lutaonensis), was characterized. The enzyme was moderately thermostable with Tm at 64.4 °C and 73.2 °C, but an activity optimum at 20 °C, indicating temperature sensitive active site interactions. MlGH17B uses β-1,3 laminari-oligosaccharides with a degree of polymerization (DP) of 4 or higher as donors. Two glucose moieties (bound in the aglycone +1 and +2 subsites) are cleaved off from the reducing end of the donor while the remaining part (bound in the glycone subsites) is transferred to an incoming β-1,3 glucan acceptor, making a β-1,6-linkage, thereby synthesizing branched or kinked oligosaccharides. Synthesized oligosaccharides up to DP26 were detected by mass spectrometry analysis, showing that repeated transfer reactions occurred, resulting in several β-1,6-linked branches. The modeled structure revealed an active site comprising five subsites: three glycone (-3, -2 and -1) and two aglycone (+1 and +2) subsites, with significant conservation of substrate interactions compared to the only crystallized 1,3-β-glucanosyltransferase from GH17 (RmBgt17A from the compost thriving fungus Rhizomucor miehei), suggesting a common catalytic mechanism, despite different phylogenetic origin, growth environment, and natural substrate. Both enzymes lacked the subdomain extending the aglycone subsites, found in GH17 endo-β-glucanases from plants, but this extension was also missing in bacterial endoglucanases (modeled here), showing that this feature does not distinguish transglycosylation from hydrolysis, but may rather relate to phylogeny.

Indexed as

FlavobacteriaceaeOligosaccharidesPhylogenyPolysaccharidesSubstrate SpecificityOligosaccharidesPolysaccharides3-glucanosyltransglycosylasecarbohydrate biosynthesislaminari-oligosaccharidesMuricauda lutaonensisthree-dimensional modelingβ-1

Identifiers

PMID38271624
PMCPMC11005184
OpenAlexW4391214796

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.