Evidence map›Paper›PMID 38270789›Full record

ArticleMolecular biology reports2024

Exploring virulence factors of Helicobacter pylori isolated from gastric biopsy.

Parisa Javanbakhat, Hadi Peeridogaheh, Rasool Nemati, Abbas Yazdanbod, Amir Teimourpour, Mahin Sadeghnezhad, Majid Esmaelizad, Roghayeh Teimourpour

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Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Global epidemiology ofMicrobiology spectrum · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Parisa JavanbakhatDepartment of Microbiology, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran.
Hadi PeeridogahehDepartment of Microbiology, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran. h.peeridogaheh@arums.ac.ir.
Rasool NematiDepartments of Internal Medicine, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran.
Abbas YazdanbodDepartments of Internal Medicine, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran.
Amir TeimourpourBlood Transfusion Research Center, High Institute for Research and Education, Tehran, Iran.
Mahin SadeghnezhadDepartment of Microbiology, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran.
Majid EsmaelizadCentral Lab, Razi Vaccine and Serum Research Institute, Karaj, Iran.
Roghayeh TeimourpourDepartment of Microbiology, School of Medicine, Ardabil University of Medical Sciences, Ardabil, Iran. r.teymourpour@gmail.com.
Ardabil University of Medical Sciences · IRHigh Institute for Education and Research in Transfusion Medicine · IRRazi Vaccine and Serum Research Institute · IR

Funding

Ardabil University of Medical Sciences 072
6 · The paper itself

Abstract

backgroundHelicobacter pylori (H. pylori) colonizes human gastric mucosa and is classified as class one carcinogenic bacteria. In this regard, this study aimed to detect major virulence factors in H. pylori strains recovered from gastric biopsy in patients referred to Aras Clinique in Ardabil, northwest of Iran (2019-2021). MATERIALS AND

methodsIn this descriptive-cross sectional study, 287 dyspeptic patients were included. For bacterial isolation, gastric biopsy specimens (n=287) were taken from gastric antrum, then aseptically were cultured on the selective medium and incubated at 37C in microaerophilic conditions for 3-5 days.

results25.18% of all (n = 70) patients were found to be infected with H. pylori upon endoscopy. Of them, 9 patients (12.857%) and 2 patients (2.875%) had peptic ulcer disease and gastric cancer respectively. According to the different patterns of virulence factors, 57 virutypes were identified in which oipA-vacAs1-vacAm2 (3, 4.28% n =) and oipA-vacAs1-vacAs2-vacAm2 (3, 4.28% n =) were the most common patterns. The simultaneous presence of vacAS2, vacAm2 and hopQ2 genes was observed in both patients with gastric cancer. OipA (n = 562.5%), VacAs1 (n = 6.75%), VacAs2 (n = 6.75%), and VacAm2 (n = 787.5%) were found to be the most prevalent virulence factor.

conclusionAccording previous studies, it is confirmed that the cagPAI gene cluster and vacA gene alleles are strongly correlated with gastritis and gastrointestinal tract adenocarcinomas. Our study indicated that 50% of the indigenous strains of H. pylori harbor these oncogenic genes and they are hypervirulent.

Indexed as

Helicobacter pyloriStomach NeoplasmsBiopsyCross-Sectional StudiesHumansPyloric AntrumGastric biopsyGastric cancerH. pyloriPeptic ulcerUrease

Identifiers

PMID38270789
OpenAlexW4391232027

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.