Evidence map›Paper›PMID 38269618›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2024

Biometric contrastive learning for data-efficient deep learning from electrocardiographic images.

Veer Sangha, Akshay Khunte, Gregory Holste, Bobak J Mortazavi, Zhangyang Wang, Evangelos K Oikonomou, Rohan Khera

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
8.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Veer SanghaSection of Cardiovascular Medicine, Department of Internal Medicine, Yale University, New Haven, CT, 06510, United States.ORCID 0000-0002-8524-1203
Akshay KhunteDepartment of Computer Science, Yale University, New Haven, CT, 06511, United States.
Gregory HolsteDepartment of Electrical and Computer Engineering, The University of Texas at Austin, Austin, TX, 78712, United States.
Bobak J MortazaviDepartment of Computer Science & Engineering, Texas A&M University, College Station, TX, 77843, United States.
Zhangyang WangDepartment of Electrical and Computer Engineering, The University of Texas at Austin, Austin, TX, 78712, United States.
Evangelos K OikonomouSection of Cardiovascular Medicine, Department of Internal Medicine, Yale University, New Haven, CT, 06510, United States.
Rohan KheraSection of Cardiovascular Medicine, Department of Internal Medicine, Yale University, New Haven, CT, 06510, United States.ORCID 0000-0001-9467-6199
Yale University · USThe University of Texas at Austin · USYale New Haven Hospital · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Evaluating and Improving Utilization of Evidence-Based Medical Therapy in Patients with Heart Failure using Automated Tools in the Electronic Health RecordK23HL153775 · NHLBI · YALE UNIVERSITY · PI KHERA, ROHAN · 2021 to 2025
$918k
A multi-modal approach for efficient, point-of-care screening of hypertrophic cardiomyopathyF32HL170592 · NHLBI · YALE UNIVERSITY · PI OIKONOMOU, EVANGELOS · 2023 to 2024
$166k
FDA HHSNCATS NIH HHS UL1 TR001863NHLBI NIH HHS F32 HL170592NHLBI NIH HHS K23 HL153775NIBIB NIH HHSNIH HHSNIH HHS K23HL153775
6 · The paper itself

Abstract

objectiveArtificial intelligence (AI) detects heart disease from images of electrocardiograms (ECGs). However, traditional supervised learning is limited by the need for large amounts of labeled data. We report the development of Biometric Contrastive Learning (BCL), a self-supervised pretraining approach for label-efficient deep learning on ECG images. MATERIALS AND

methodsUsing pairs of ECGs from 78 288 individuals from Yale (2000-2015), we trained a convolutional neural network to identify temporally separated ECG pairs that varied in layouts from the same patient. We fine-tuned BCL-pretrained models to detect atrial fibrillation (AF), gender, and LVEF < 40%, using ECGs from 2015 to 2021. We externally tested the models in cohorts from Germany and the United States. We compared BCL with ImageNet initialization and general-purpose self-supervised contrastive learning for images (simCLR).

resultsWhile with 100% labeled training data, BCL performed similarly to other approaches for detecting AF/Gender/LVEF < 40% with an AUROC of 0.98/0.90/0.90 in the held-out test sets, it consistently outperformed other methods with smaller proportions of labeled data, reaching equivalent performance at 50% of data. With 0.1% data, BCL achieved AUROC of 0.88/0.79/0.75, compared with 0.51/0.52/0.60 (ImageNet) and 0.61/0.53/0.49 (simCLR). In external validation, BCL outperformed other methods even at 100% labeled training data, with an AUROC of 0.88/0.88 for Gender and LVEF < 40% compared with 0.83/0.83 (ImageNet) and 0.84/0.83 (simCLR). DISCUSSION AND

conclusionA pretraining strategy that leverages biometric signatures of different ECGs from the same patient enhances the efficiency of developing AI models for ECG images. This represents a major advance in detecting disorders from ECG images with limited labeled data.

Indexed as

Atrial FibrillationDeep LearningArtificial IntelligenceBiometryElectrocardiographyHumans

Identifiers

PMID38269618
PMCPMC10990541
OpenAlexW4391225171

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.