Evidence map›Paper›PMID 38267854›Full record

ArticleBMC genomics2024

Genetic background of juniper (Juniperus spp.) consumption predicted by fecal near-infrared spectroscopy in divergently selected goats raised in harsh rangeland environments.

Henrique A Mulim, John W Walker, Daniel F Waldron, Danilo G Quadros, Lorena F Benfica, Felipe E de Carvalho, Luiz F Brito

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Henrique A MulimPurdue University, West Lafayette, IN, USA. hmulim@purdue.edu.
John W WalkerTexas A&M AgriLife Research and Extension Center, San Angelo, TX, USA.
Daniel F WaldronTexas A&M AgriLife Research and Extension Center, San Angelo, TX, USA.
Danilo G QuadrosUniversity of Arkansas System Division of Agriculture, Little Rock, AR, USA.
Lorena F BenficaPurdue University, West Lafayette, IN, USA.
Felipe E de CarvalhoPurdue University, West Lafayette, IN, USA.
Luiz F BritoPurdue University, West Lafayette, IN, USA. britol@purdue.edu.
Purdue University West Lafayette · USUniversidade Estadual Paulista (Unesp) · BRUniversity of Arkansas System · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundJunipers (Juniperus spp.) are woody native, invasive plants that have caused encroachment problems in the U.S. western rangelands, decreasing forage productivity and biodiversity. A potential solution to this issue is using goats in targeted grazing programs. However, junipers, which grow in dry and harsh environmental conditions, use chemical defense mechanisms to deter herbivores. Therefore, genetically selecting goats for increased juniper consumption is of great interest for regenerative rangeland management. In this context, the primary objectives of this study were to: 1) estimate variance components and genetic parameters for predicted juniper consumption in divergently selected Angora (ANG) and composite Boer x Spanish (BS) goat populations grazing on Western U.S. rangelands; and 2) to identify genomic regions, candidate genes, and biological pathways associated with juniper consumption in these goat populations.

resultsThe average juniper consumption was 22.4% (± 18.7%) and 7.01% (± 12.1%) in the BS and ANG populations, respectively. The heritability estimates (realized heritability within parenthesis) for juniper consumption were 0.43 ± 0.02 (0.34 ± 0.06) and 0.19 ± 0.03 (0.13 ± 0.03) in BS and ANG, respectively, indicating that juniper consumption can be increased through genetic selection. The repeatability values of predicted juniper consumption were 0.45 for BS and 0.28 for ANG. A total of 571 significant SNP located within or close to 231 genes in BS, and 116 SNP related to 183 genes in ANG were identified based on the genome-wide association analyses. These genes are primarily associated with biological pathways and gene ontology terms related to olfactory receptors, intestinal absorption, and immunity response.

conclusionsThese findings suggest that juniper consumption is a heritable trait of polygenic inheritance influenced by multiple genes of small effects. The genetic parameters calculated indicate that juniper consumption can be genetically improved in both goat populations.

Indexed as

JuniperusAnimalsGenetic BackgroundGenome-Wide Association StudyGoatsSpectroscopy, Near-InfraredBiological controlGenome wide association studyMonoterpene

Identifiers

PMID38267854
PMCPMC10809474
OpenAlexW4391160789

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.