Evidence map›Paper›PMID 38267840›Full record

ArticleBMC genomics2024

Genome-wide identification of B-box zinc finger (BBX) gene family in Medicago sativa and their roles in abiotic stress responses.

Shuxia Li, Shuaiqi Guo, Xueqin Gao, Xiaotong Wang, Yaling Liu, Jing Wang, Xiaohong Li, Jinqing Zhang, Bingzhe Fu

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shuxia LiCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China. lishuxia620@163.com.
Shuaiqi Guo *Fujian Xinnong Dazheng Bio-Engineering Co., Ltd, Fuzhou, China.
Xueqin GaoCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Xiaotong WangCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Yaling LiuInner Mongolia Pratacultural Technology Innovation Center Co., Ltd, Hohhot, China.
Jing WangCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Xiaohong LiCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Jinqing ZhangCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China.
Bingzhe FuCollege of Forestry and Prataculture, Ningxia University, Yinchuan, China. Fbzhe19@163.com.
Ningxia University · CNNingxia Academy of Agriculture and Forestry Sciences · CN

Funding

Inner Mongolia Pratacultural Technology Innovation Center Co., Ltd CCPTZX2023B04National Natural Science Foundation of China 32101426Natural Science Foundation of Ningxia Province 2023AAC05019
6 · The paper itself

Abstract

backgroundB-box (BBX) family is a class of zinc finger transcription factors (TFs) that play essential roles in regulating plant growth, development, as well as abiotic stress. However, no systematic analysis of BBX genes has yet been conducted in alfalfa (Medica go sativa L.), and their functions have not been elucidated up to now.

resultsIn this study, 28 MsBBX genes were identified from the alfalfa genome, which were clustered into 4 subfamilies according to an evolutionary tree of BBX proteins. Exon-intron structure and conserved motif analysis reflected the evolutionary conservation of MsBBXs in alfalfa. Collinearity analysis showed that segmental duplication promoted the expansion of the MsBBX family. Analysis of cis-regulatory elements suggested that the MsBBX genes possessed many growth/development-, light-, phytohormone-, and abiotic stress-related elements. MsBBX genes were differentially expressed in leaves, flowers, pre-elongated stems, elongated stems, roots and nodules, and most MsBBXs were remarkably induced by drought, salt and various plant growth regulators (ABA, JA, and SA). Further functional verification demonstrated that overexpressing of the MsBBX11 gene clearly promoted salt tolerance in transgenic Arabidopsis by regulating growth and physiological processes of seedlings.

conclusionsThis research provides insights into further functional research and regulatory mechanisms of MsBBX family genes under abiotic stress of alfalfa.

Indexed as

ArabidopsisMedicago sativaBiological EvolutionDroughtsPlant Growth RegulatorsStress, PhysiologicalPlant Growth RegulatorsAbiotic stressAlfalfaBBX gene familyFunctional verificationGene expressionPhytohormone

Identifiers

PMID38267840
PMCPMC10809573
OpenAlexW4391160463

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.