Evidence map›Paper›PMID 38267515›Full record

ArticleCommunications biology2024

The phosphorylated pathway of serine biosynthesis affects sperm, embryo, and sporophyte development, and metabolism in Marchantia polymorpha.

Mengyao Wang, Hiromitsu Tabeta, Kinuka Ohtaka, Ayuko Kuwahara, Ryuichi Nishihama, Toshiki Ishikawa, Kiminori Toyooka, Mayuko Sato, Mayumi Wakazaki, Hiromichi Akashi and 8 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 8 institutions in 1 country.

Mengyao WangRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Hiromitsu Tabeta *RIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-5906-7838
Kinuka Ohtaka *RIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Ayuko KuwaharaRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID 0000-0002-7032-732X
Toshiki IshikawaGraduate School of Science and Engineering, Saitama University, Saitama, Japan.ORCID 0000-0001-8083-6542
Kiminori ToyookaRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-6414-5191
Mayuko SatoRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-9876-5612
Mayumi WakazakiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Hiromichi AkashiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Hiroshi TsugawaRIKEN Center for Sustainable Resource Science, Yokohama, Japan.ORCID 0000-0002-2015-3958
Tsubasa ShojiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Yozo OkazakiRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Keisuke YoshidaInstitute of Innovative Research, Tokyo Institute of Technology, Yokohama, Japan.ORCID 0000-0001-6542-6254
Ryoichi SatoRIKEN Center for Sustainable Resource Science, Yokohama, Japan.
Ali FerjaniDepartment of Biology, Tokyo Gakugei University, Tokyo, Japan.ORCID 0000-0003-1157-3261
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto, Japan.ORCID 0000-0002-9712-4872
Masami Yokota HiraiRIKEN Center for Sustainable Resource Science, Yokohama, Japan. masami.hirai@riken.jp.ORCID 0000-0003-0802-6208
RIKEN Center for Sustainable Resource Science · JPTokyo Gakugei University · JPJapan Women's University · JPKyoto University · JPMie University · JPSaitama University · JPTokyo Institute of Technology · JPTokyo University of Science · JP

Funding

MEXT | Japan Society for the Promotion of Science (JSPS) 20H04852MEXT | Japan Society for the Promotion of Science (JSPS) 25113010
6 · The paper itself

Abstract

Serine metabolism is involved in various biological processes. Here we investigate primary functions of the phosphorylated pathway of serine biosynthesis in a non-vascular plant Marchantia polymorpha by analyzing knockout mutants of MpPGDH encoding 3-phosphoglycerate dehydrogenase in this pathway. Growth phenotypes indicate that serine from the phosphorylated pathway in the dark is crucial for thallus growth. Sperm development requires serine from the phosphorylated pathway, while egg formation does not. Functional MpPGDH in the maternal genome is necessary for embryo and sporophyte development. Under high CO

Indexed as

MarchantiaSerineGlycolatesSeedsSpermatozoaGlycolatesSerine

Identifiers

PMID38267515
PMCPMC10808223
OpenAlexW4391168619

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.