Evidence map›Paper›PMID 38267013›Full record

ArticleNeuropsychopharmacology reports2024

Association study of a single nucleotide polymorphism in the hypoxia response element of the macrophage migration inhibitory factor gene promoter with suicide completers in the Japanese population.

Toshiyuki Shirai, Satoshi Okazaki, Takaki Tanifuji, Ikuo Otsuka, Masao Miyachi, Shohei Okada, Ryota Shindo, Tadasu Horai, Kentaro Mouri, Motonori Takahashi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Neuropsychopharmacology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Toshiyuki ShiraiDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Satoshi OkazakiDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.ORCID https://orcid.org/0000-0001-5953-5526
Takaki TanifujiDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Ikuo OtsukaDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Masao MiyachiDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Shohei OkadaDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Ryota ShindoDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Tadasu HoraiDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Kentaro MouriDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Motonori TakahashiDivision of Legal Medicine, Department of Community Medicine and Social Health Science, Kobe University Graduate School of Medicine, Kobe, Japan.
Takeshi KondoDivision of Legal Medicine, Department of Community Medicine and Social Health Science, Kobe University Graduate School of Medicine, Kobe, Japan.
Yasuhiro UenoDivision of Legal Medicine, Department of Community Medicine and Social Health Science, Kobe University Graduate School of Medicine, Kobe, Japan.
Akitoyo HishimotoDepartment of Psychiatry, Kobe University Graduate School of Medicine, Kobe, Japan.
Kobe University · JP

Funding

Japan Society for the Promotion of Science JP17H04249Japan Society for the Promotion of Science JP21H02852Japan Society for the Promotion of Science JP21K07520Japan Society for the Promotion of Science JP21K15712
6 · The paper itself

Abstract

backgroundMore than 800 000 people die by suicide annually. The heritability of suicide is 30%-50%. We focused on the hypoxia response element (HRE), which promotes the expression of macrophage migration inhibitory factor (MIF) via the hypoxia-inducible factor (HIF) pathway, important in neurogenesis and neuroprotection. We examined a genetic polymorphism of rs17004038, a single-nucleotide polymorphism (SNP), in suicide completers and controls.

methodsThe study population included 1336 suicide completers and 814 unrelated healthy controls. All participants were Japanese. We obtained peripheral blood, extracted DNA, and genotyped the patients for SNP rs17004038 (C > A).

resultsNo significant differences were observed between the two groups in either the allele or genotype analyses. Subgroup analyses by sex, age (<40 or ≥40), and suicide method (violent or nonviolent suicide) were performed with similar results.

conclusionNo association was observed between SNP rs17004038 and suicide completion. Although it is challenging to collect a large number of samples from suicide completers, further MIF-related genetic studies, including those of rs17004038, are necessary with larger sample sizes.

Indexed as

Macrophage Migration-Inhibitory FactorsSuicideGenetic Predisposition to DiseaseHumansHypoxiaIntramolecular OxidoreductasesJapanPolymorphism, Single NucleotideResponse ElementsIntramolecular OxidoreductasesMacrophage Migration-Inhibitory FactorsMIF protein, humangenetics: Humanhypoxia inducible factormacrophage migration inhibitory factorsingle nucleotide polymorphismsuicide: basic/clinical

Identifiers

PMID38267013
PMCPMC10932791
OpenAlexW4391188040

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.