Evidence map›Paper›PMID 38265937›Full record

ArticleCell reports2024

Mechanistic and structural studies reveal NRAP-1-dependent coincident activation of NMDARs.

Dayton J Goodell, Frank G Whitby, Jerry E Mellem, Ning Lei, Penelope J Brockie, Aleksander J Maricq, Debra M Eckert, Christopher P Hill, David M Madsen, Andres V Maricq

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Dayton J GoodellDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA.
Frank G WhitbyDepartment of Biochemistry, University of Utah, Salt Lake City, UT 84112-5650, USA.
Jerry E MellemDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA.
Ning LeiDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA.
Penelope J BrockieDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA.
Aleksander J MaricqSchool of Computing, University of Utah, Salt Lake City, UT 84112, USA.
Debra M EckertDepartment of Biochemistry, University of Utah, Salt Lake City, UT 84112-5650, USA.
Christopher P HillDepartment of Biochemistry, University of Utah, Salt Lake City, UT 84112-5650, USA.
David M MadsenDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA.
Andres V MaricqDepartment of Neurobiology, University of Utah, Salt Lake City, UT 84112-9458, USA. Electronic address: maricq@neuro.utah.edu.
University of Utah · US

Funding

A Synchrotron Radiation Structural Biology ResourcesP30GM133894 · NIGMS · STANFORD UNIVERSITY · PI Thomas Michael Weiss · 2020 to 2026
$43.3M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of NMDAR-Mediated Synaptic SignalingR01NS125359 · NINDS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Andres Villu Maricq · 2022 to 2026
$2.6M
NRAP-1 control of NMDA receptor-mediated synaptic transmissionF32NS110173 · NINDS · UNIVERSITY OF UTAH · PI GOODELL, DAYTON JOSHUA · 2019 to 2020
$127k
NIGMS NIH HHS P30 GM133894NIH HHS P40 OD010440NINDS NIH HHS F32 NS110173NINDS NIH HHS R01 NS125359
6 · The paper itself

Abstract

N-methyl-D-aspartate (NMDA)-type ionotropic glutamate receptors have essential roles in neurotransmission and synaptic plasticity. Previously, we identified an evolutionarily conserved protein, NRAP-1, that is required for NMDA receptor (NMDAR) function in C. elegans. Here, we demonstrate that NRAP-1 was sufficient to gate NMDARs and greatly enhanced glutamate-mediated NMDAR gating, thus conferring coincident activation properties to the NMDAR. Intriguingly, vertebrate NMDARs-and chimeric NMDARs where the amino-terminal domain (ATD) of C. elegans NMDARs was replaced by the ATD from vertebrate receptors-were spontaneously active when ectopically expressed in C. elegans neurons. Thus, the ATD is a primary determinant of NRAP-1- and glutamate-mediated gating of NMDARs. We determined the crystal structure of NRAP-1 at 1.9-Å resolution, which revealed two distinct domains positioned around a central low-density lipoprotein receptor class A domain. The NRAP-1 structure, combined with chimeric and mutational analyses, suggests a model where the three NRAP-1 domains work cooperatively to modify the gating of NMDARs.

Indexed as

Caenorhabditis elegansReceptors, N-Methyl-D-AspartateAnimalsGlutamic AcidN-MethylaspartateSynaptic TransmissionGlutamic AcidN-MethylaspartateReceptors, N-Methyl-D-Aspartateauxiliary proteincoincident activationCP: Molecular biologyCP: Neurosciencecrystal structureglutamateiGluRLDLa domainmetaplasticityNMDA receptorreceptor gatingsynaptic plasticity

Identifiers

PMID38265937
PMCPMC11531325
OpenAlexW4391154556

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.