Evidence map›Paper›PMID 38265399›Full record

ReviewCurrent medicinal chemistry2024

Current Development of Data Resources and Bioinformatics Tools for Anticoronavirus Peptide.

Bowen Li, Min Li, Chunying Lu, Yifei Wu, Heng Chen, Bifang He

Abstract readReview
PubMed Publisher
In one paragraph

Review in Current medicinal chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Bowen LiMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.
Min LiMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.
Chunying LuMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.
Yifei WuMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.
Heng ChenMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.
Bifang HeMedical College, Guizhou University, Guiyang, 550025, Guizhou, China.

Funding

Guizhou University [2020]5,[2020]5,[2020]5,[2020]5National Natural Science Foundation of China 62261006,62071099,62263003,62071099,62261006,62263003,62261006,62071099,62263003,62261006,62071099,62263003
6 · The paper itself

Abstract

backgroundSince December 2019, the emergence of severe acute respiratory syndrome coronavirus 2, which gave rise to coronavirus disease 2019 (COVID-19), has considerably impacted global health. The identification of effective anticoronavirus peptides (ACVPs) and the establishment of robust data storage methods are critical in the fight against COVID-19. Traditional wet-lab peptide discovery approaches are timeconsuming and labor-intensive. With advancements in computer technology and bioinformatics, machine learning has gained prominence in the extraction of functional peptides from extensive datasets.

methodsIn this study, we comprehensively review data resources and predictors related to ACVPs published over the past two decades. In addition, we analyze the influence of various factors on model performance.

resultsWe have reviewed nine ACVP-containing databases, which integrate detailed information on protein fragments effective against coronaviruses, providing crucial references for the development of antiviral drugs and vaccines. Additionally, we have assessed 15 peptide predictors for antiviral or specifically anticoronavirus activity. These predictors employ computational models to swiftly screen potential antiviral candidates, offering an efficient pathway for drug development.

conclusionOur study provides conclusive results and insights into the performance of different computational methods, and sheds light on the future trajectory of bioinformatics tools for ACVPs. This work offers a representative overview of contributions to the field, with an emphasis on the crucial role of ACVPs in combating COVID-19.

Indexed as

Antiviral AgentsComputational BiologyPeptidesSARS-CoV-2COVID-19COVID-19 Drug TreatmentHumansMachine LearningAntiviral AgentsPeptidesanticoronavirus peptidebioinformatics tools.COVID-19deep learningmachine learningSARS-CoV-2

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.