Evidence map›Paper›PMID 38264928›Full record

ArticleJournal of the Royal Society, Interface2024

The reproduction number and its probability distribution for stochastic viral dynamics.

Bevelynn Williams, Jonathan Carruthers, Joseph J Gillard, Grant Lythe, Alan S Perelson, Ruy M Ribeiro, Carmen Molina-París, Martín López-García

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of the Royal Society, Interface, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Bevelynn WilliamsDepartment of Applied Mathematics, School of Mathematics, University of Leeds, Leeds, UK.ORCID 0000-0002-9119-6568
Jonathan CarruthersUK Health Security Agency, Salisbury, UK.
Joseph J GillardCBR Division, Defence Science and Technology Laboratory, Salisbury, UK.ORCID 0000-0001-7486-8927
Grant LytheDepartment of Applied Mathematics, School of Mathematics, University of Leeds, Leeds, UK.
Alan S PerelsonT-6, Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, NM, USA.
Ruy M RibeiroT-6, Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, NM, USA.ORCID 0000-0002-3988-8241
Carmen Molina-ParísT-6, Theoretical Biology and Biophysics, Theoretical Division, Los Alamos National Laboratory, Los Alamos, NM, USA.ORCID 0000-0001-9828-6737
Martín López-GarcíaDepartment of Applied Mathematics, School of Mathematics, University of Leeds, Leeds, UK.ORCID 0000-0003-3833-8595

Funding

Spatial Models of Intrahepatic Hepatitis C Virus Propagation in HumansR01AI116868 · NIAID · TRIAD NATIONAL SECURITY, LLC · PI ASHWIN BALAGOPAL, Ruy M Ribeiro · 2016 to 2026
$8.5M
Collaborative Integration of HCV Molecular Virology and Mathematical ModelingR01AI078881 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI PERELSON, ALAN S, UPRICHARD, SUSAN L. · 2011 to 2025
$7.5M
Modeling Viral and T Lymphocyte DynamicsR01OD011095 · OD · TRIAD NATIONAL SECURITY, LLC · PI PERELSON, ALAN S · 2012 to 2024
$5.0M
US-UK Collab: Modelling reassortment at the cellular, clinical, and phylogenetic level in emerging BunyavirusesR01AI167048 · NIAID · TRIAD NATIONAL SECURITY, LLC · PI MOLINA-PARIS, CARMEN · 2021 to 2025
$2.2M
NIAID NIH HHS R01 AI078881NIAID NIH HHS R01 AI116868NIAID NIH HHS R01 AI167048NIH HHS R01 OD011095
6 · The paper itself

Abstract

We consider stochastic models of individual infected cells. The reproduction number,

Indexed as

ReproductionVirionProbabilityeclipse phaseErlang distributioninfectious phasereproduction numberstochastic modelviral burst size

Identifiers

PMID38264928
PMCPMC10806437

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.