Evidence map›Paper›PMID 38264162›Full record

ArticleFEMS microbes2024

A targeted approach to enrich host-associated bacteria for metagenomic sequencing.

Ashley M Dungan, Kshitij Tandon, Vanta Jameson, Cecilie Ravn Gotze, Linda L Blackall, Madeleine J H van Oppen

Abstract read
In one paragraph

Article in FEMS microbes, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ashley M DunganSchool of BioSciences, University of Melbourne, Melbourne, VIC 3010, Australia.ORCID https://orcid.org/0000-0003-0958-2177
Kshitij TandonSchool of BioSciences, University of Melbourne, Melbourne, VIC 3010, Australia.ORCID https://orcid.org/0000-0003-3022-0808
Vanta JamesonMelbourne Cytometry Platform, Department of Microbiology and Immunology, University of Melbourne, Melbourne, VIC 3010, Australia.
Cecilie Ravn GotzeSchool of BioSciences, University of Melbourne, Melbourne, VIC 3010, Australia.
Linda L BlackallSchool of BioSciences, University of Melbourne, Melbourne, VIC 3010, Australia.
Madeleine J H van OppenSchool of BioSciences, University of Melbourne, Melbourne, VIC 3010, Australia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Multicellular eukaryotic organisms are hosts to communities of bacteria that reside on or inside their tissues. Often the eukaryotic members of the system contribute to high proportions of metagenomic sequencing reads, making it challenging to achieve sufficient sequencing depth to evaluate bacterial ecology. Stony corals are one such complex community; however, separation of bacterial from eukaryotic (primarily coral and algal symbiont) cells has so far not been successful. Using a combination of hybridization chain reaction fluorescence

Indexed as

coralFACSFISHhost-associatedhybridization chain reactionmetagenomicssymbiosis

Identifiers

PMID38264162
PMCPMC10804224

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.