Evidence map›Paper›PMID 38261568›Full record

ArticlePloS one2024

ncRNAs-mediated TIMELESS overexpression in lung adenocarcinoma correlates with reduced tumor immune cell infiltration and poor prognosis.

Xinliang Gao, Mingbo Tang, Suyan Tian, Jialin Li, Shixiong Wei, Shucheng Hua, Wei Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xinliang GaoDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.ORCID 0000-0002-6951-4785
Mingbo TangDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.
Suyan TianDivision of Clinical Research, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.
Jialin LiDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.
Shixiong WeiDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.
Shucheng HuaDepartment of Respiratory Medicine, Center for Pathogen Biology and Infectious Diseases, Changchun, Jilin Province, PR China.
Wei LiuDepartment of Thoracic Surgery, The First Hospital of Jilin University, Changchun, Jilin Province, PR China.ORCID 0000-0002-0980-7818
Jilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung adenocarcinoma (LUAD) has a poor prognosis. Circadian genes such as TIMELESS have been associated with several pathologies, including cancer. The expression of TIMELESS and the relationship between TIMELESS, infiltration of tumors and prognosis in LUAD requires further investigation. In this study, we investigated the expression of TIMELESS and its association with survival across several types of human cancer using data from The Cancer Genome Atlas (TCGA) and the Genotype-Tissue Expression Program. Noncoding RNAs (ncRNAs) regulating overexpression of TIMELESS in lung adenocarcinoma (LUAD) were explored with expression, correlation, and survival analyses. Immune cell infiltration and biomarkers were analyzed between different TIMELESS expression levels. The relationship between TIMELESS expression and immunophenoscores, which were used to predict response to immunotherapy, was evaluated. TIMELESS was identified as a potential oncogene in LUAD. NcRNA analysis showed MIR4435-2HG/hsa-miR-1-3p may interact with TIMELESS in a competitive endogenous RNA network in LUAD tumor tissues. Most immune cells were significantly decreased in TCGA LUAD tumor tissues with high TIMELESS expression except for CD4+T cells and Th2 cells. TIMELESS expression in LUAD tumor tissues was significantly negatively correlated with neutrophil biomarkers, dendritic cell biomarkers (HLA-DPB1, HLA-DQB1, HLA-DRA, HLA-DPA1, CD1C) and an immunophenoscore that predicted outcomes associated with the use of immune checkpoint inhibitors. These findings imply that ncRNAs-mediated TIMELESS overexpression in LUAD tumor tissues correlated with poor prognosis, reduced immune cell infiltration in the tumor microenvironment, and poor response to immune checkpoint inhibitors.

Indexed as

Adenocarcinoma of LungLung NeoplasmsBiomarkersCell Cycle ProteinsHumansImmune Checkpoint InhibitorsIntracellular Signaling Peptides and ProteinsOncogenesRNA, UntranslatedTumor MicroenvironmentBiomarkersCell Cycle ProteinsImmune Checkpoint InhibitorsIntracellular Signaling Peptides and ProteinsRNA, UntranslatedTIMELESS protein, human

Identifiers

PMID38261568
PMCPMC10805305
OpenAlexW4391131344

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.