Evidence map›Paper›PMID 38260642›Full record

ArticlebioRxiv : the preprint server for biology2024

Nucleoid-associated proteins shape the global protein occupancy and transcriptional landscape of a clinical isolate of

Yulduz Rakibova, Drew T Dunham, Kimberley D Seed, P Lydia Freddolino

Abstract readPreprint
PubMed Full text at PMC Publisher
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Yulduz RakibovaDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI, USA.
Drew T DunhamDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, USA.
Kimberley D SeedDepartment of Plant and Microbial Biology, University of California, Berkeley, CA, USA.ORCID 0000-0002-0139-1600
P Lydia FreddolinoDepartment of Biological Chemistry, University of Michigan, Ann Arbor, MI, USA.ORCID 0000-0002-5821-4226

Funding

Phage resistance and mobile genetic elements in Vibrio choleraeR01AI127652 · NIAID · UNIVERSITY OF CALIFORNIA BERKELEY · PI SEED, KIMBERLEY DIANE · 2016 to 2025
$4.6M
Building a unified framework for understanding bacterial gene regulation and chromosomal architectureR35GM128637 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Lydia Petra Freddolino · 2018 to 2026
$3.6M
NIAID NIH HHS R01 AI127652NIGMS NIH HHS R35 GM128637
6 · The paper itself

Abstract

Importance: New strains of the bacterial pathogen

Identifiers

PMID38260642
PMCPMC10802314

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.