Evidence map›Paper›PMID 38260636›Full record

ArticlebioRxiv : the preprint server for biology2024

Long-Term Potentiation Produces a Sustained Expansion of Synaptic Information Storage Capacity in Adult Rat Hippocampus.

Mohammad Samavat, Thomas M Bartol, Cailey Bromer, Dusten D Hubbard, Dakota C Hanka, Masaaki Kuwajima, John M Mendenhall, Patrick H Parker, Jared B Bowden, Wickliffe C Abraham and 2 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 4 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 4 countries.

Mohammad SamavatDepartment of Electrical and Computer Engineering, Jacobs School of Engineering, UC San Diego.ORCID 0000-0002-5283-0423
Thomas M BartolComputational Neurobiology Laboratory, The Salk Institute for Biological Sciences, La Jolla, CA 92037.
Cailey BromerComputational Neurobiology Laboratory, The Salk Institute for Biological Sciences, La Jolla, CA 92037.
Dusten D HubbardCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
Dakota C HankaCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
Masaaki KuwajimaCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
John M MendenhallCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
Patrick H ParkerCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
Jared B BowdenCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
Wickliffe C AbrahamDepartment of Psychology and Brain Health Research Centre, University of Otago, Dunedin, 9016, New Zealand.
Terrence J SejnowskiComputational Neurobiology Laboratory, The Salk Institute for Biological Sciences, La Jolla, CA 92037.
Kristen M HarrisCenter for Learning and Memory, The University of Texas at Austin, Austin, TX 78712.
The University of Texas at Austin · USSalk Institute for Biological Studies · USBrain Research New Zealand · NZ

Funding

TrainingP41GM103712 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FAEDER, JAMES · 2012 to 2021
$16.3M
Neurosciences Graduate Training ProgramT32NS061847 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Brenda L Bloodgood · 2008 to 2026
$7.7M
Synaptic plasticity across the lifespanR01MH095980 · NIMH · UNIVERSITY OF TEXAS AT AUSTIN · PI KRISTEN M HARRIS · 2012 to 2026
$5.0M
CRCNS: Regulating AMPAR trapping and desensitization in the postsynaptic density R01MH115556 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI SEJNOWSKI, TERRENCE J · 2017 to 2020
$1.2M
CRCNS: Regulation of assembly and disassembly of the postsynaptic density during synaptic plasticity and its effect on AMPAR trappingR01MH129066 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI KENNEDY, MARY B, SEJNOWSKI, TERRENCE J · 2021 to 2024
$1.2M
Synaptic plasticity across the lifespanR56MH095980 · NIMH · UNIVERSITY OF TEXAS AT AUSTIN · PI HARRIS, KRISTEN M · 2019 to 2019
$619k
NIGMS NIH HHS P41 GM103712NIMH NIH HHS R01 MH095980NIMH NIH HHS R01 MH115556NIMH NIH HHS R01 MH129066NIMH NIH HHS R56 MH095980NINDS NIH HHS T32 NS061847
6 · The paper itself

Abstract

Long-term potentiation (LTP) has become a standard model for investigating synaptic mechanisms of learning and memory. Increasingly, it is of interest to understand how LTP affects the synaptic information storage capacity of the targeted population of synapses. Here, structural synaptic plasticity during LTP was explored using three-dimensional reconstruction from serial section electron microscopy. Storage capacity was assessed by applying a new analytical approach, Shannon information theory, to delineate the number of functionally distinguishable synaptic strengths. LTP was induced by delta-burst stimulation of perforant pathway inputs to the middle molecular layer of hippocampal dentate granule cells in adult rats. Spine head volumes were measured as predictors of synaptic strength and compared between LTP and control hemispheres at 30 min and 2 hr after the induction of LTP. Synapses from the same axon onto the same dendrite were used to determine the precision of synaptic plasticity based on the similarity of their physical dimensions. Shannon entropy was measured by exploiting the frequency of spine heads in functionally distinguishable sizes to assess the degree to which LTP altered the number of bits of information storage. Outcomes from these analyses reveal that LTP expanded storage capacity; the distribution of spine head volumes was increased from 2 bits in controls to 3 bits at 30 min and 2.7 bits at 2 hr after the induction of LTP. Furthermore, the distribution of spine head volumes was more uniform across the increased number of functionally distinguishable sizes following LTP, thus achieving more efficient use of coding space across the population of synapses.

Identifiers

PMID38260636
PMCPMC10802612
OpenAlexW4390859406

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.