Evidence map›Paper›PMID 38260331›Full record

ArticlebioRxiv : the preprint server for biology2024

Spatiotemporal Mapping and Molecular Basis of Whole-brain Circuit Maturation.

Jian Xue, Andrew T Brawner, Jacqueline R Thompson, Tushar D Yelhekar, Kyra T Newmaster, Qiang Qiu, Yonatan A Cooper, C Ron Yu, Yasir H Ahmed-Braima, Yongsoo Kim and 1 more

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 6 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 1 country.

Jian XueDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Andrew T BrawnerDepartment of Psychiatry and Behavioral Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Jacqueline R ThompsonDepartment of Psychiatry and Behavioral Sciences, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Tushar D YelhekarDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Kyra T NewmasterDepartment of Neural and Behavioral Sciences, The Pennsylvania State University, Hershey, PA 17033, USA.
Qiang QiuStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Yonatan A CooperCurrent address: Department of Human Genetics, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA.
C Ron YuStowers Institute for Medical Research, Kansas City, MO 64110, USA.
Yasir H Ahmed-BraimaDepartment of Biology, Syracuse University, Syracuse, NY 13244, USA.
Yongsoo KimDepartment of Neural and Behavioral Sciences, The Pennsylvania State University, Hershey, PA 17033, USA.
Yingxi LinDepartment of Psychiatry, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
The University of Texas Southwestern Medical Center · USPennsylvania State University · USStowers Institute for Medical Research · USSUNY Upstate Medical University · USSyracuse University · USUniversity of California, Los Angeles · US

Funding

Circuit architecture and dynamics representation in odor perceptionR01DC014701 · NIDCD · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI Thomas A Cleland, Yingxi Lin · 2015 to 2026
$6.4M
Establishing Common Coordinate Framework for Quantitative Cell Census in Developing Mouse BrainsRF1MH124605 · NIMH · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI GEE, JAMES C, KIM, YONGSOO · 2020 to 2020
$3.8M
Synaptic Mechanisms for Contextual Memory FormationR01MH116673 · NIMH · UPSTATE MEDICAL UNIVERSITY · PI CASTILLO, PABLO E, LIN, YINGXI · 2019 to 2023
$3.4M
Mechanisms Governing Activity-dependent Postnatal Brain DevelopmentR01NS123710 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI Yingxi Lin · 2022 to 2026
$3.0M
Activity-Dependent Transcriptional Pathways Underlying Synaptic Mechanisms for Memory Discrimination and Generalization.R01NS115543 · NINDS · UT SOUTHWESTERN MEDICAL CENTER · PI CASTILLO, PABLO E, LIN, YINGXI · 2020 to 2024
$3.0M
NIDCD NIH HHS R01 DC014701NIMH NIH HHS R01 MH116673NIMH NIH HHS RF1 MH124605NINDS NIH HHS R01 NS115543NINDS NIH HHS R01 NS123710
6 · The paper itself

Abstract

Brain development is highly dynamic and asynchronous, marked by the sequential maturation of functional circuits across the brain. The timing and mechanisms driving circuit maturation remain elusive due to an inability to identify and map maturing neuronal populations. Here we create DevATLAS (Developmental Activation Timing-based Longitudinal Acquisition System) to overcome this obstacle. We develop whole-brain mapping methods to construct the first longitudinal, spatiotemporal map of circuit maturation in early postnatal mouse brains. Moreover, we uncover dramatic impairments within the deep cortical layers in a neurodevelopmental disorders (NDDs) model, demonstrating the utility of this resource to pinpoint when and where circuit maturation is disrupted. Using DevATLAS, we reveal that early experiences accelerate the development of hippocampus-dependent learning by increasing the synaptically mature granule cell population in the dentate gyrus. Finally, DevATLAS enables the discovery of molecular mechanisms driving activity-dependent circuit maturation.

Indexed as

activity-dependentcircuit maturationDevATLASdevelopmental brain templatesenergy metabolic pathwayenvironmental enrichmentneurodevelopmental disorderspatiotemporal mapwhole-brain mapping

Identifiers

PMID38260331
PMCPMC10802351
OpenAlexW4390656915

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.