Evidence map›Paper›PMID 38259324›Full record

ArticleFrontiers in dental medicine2023

Single Cell RNA Sequencing Reveals Human Tooth Type Identity and Guides

Sesha Hanson-Drury, Anjali P Patni, Deborah L Lee, Ammar Alghadeer, Yan Ting Zhao, Devon Duron Ehnes, Vivian N Vo, Sydney Y Kim, Druthi Jithendra, Ashish Phal and 6 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in dental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 3 countries.

Sesha Hanson-DruryDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Anjali P PatniDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Deborah L LeeDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Ammar AlghadeerDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Yan Ting ZhaoDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Devon Duron EhnesDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Vivian N VoDepartment of Biochemistry, School of Medicine, University of Washington, Seattle, WA, United States.
Sydney Y KimDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
Druthi JithendraInstitute for Stem Cell and Regenerative Medicine, School of Medicine, University of Washington, Seattle, WA, United States.
Ashish PhalDepartment of Biochemistry, School of Medicine, University of Washington, Seattle, WA, United States.
Natasha I EdmanDepartment of Biochemistry, School of Medicine, University of Washington, Seattle, WA, United States.
Thomas SchlichthaerleDepartment of Biochemistry, School of Medicine, University of Washington, Seattle, WA, United States.
David BakerDepartment of Biochemistry, School of Medicine, University of Washington, Seattle, WA, United States.
Jessica E YoungInstitute for Stem Cell and Regenerative Medicine, School of Medicine, University of Washington, Seattle, WA, United States.
Julie MathieuInstitute for Stem Cell and Regenerative Medicine, School of Medicine, University of Washington, Seattle, WA, United States.
Hannele Ruohola-BakerDepartment of Oral Health Sciences, School of Dentistry, University of Washington, Seattle, WA, United States.
University of Washington · USSRM Institute of Science and Technology · IN

Funding

Progenitor Cell Biology Consortium Administrative Coordinating CenterU01HL099997 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI TERRIN, MICHAEL L · 2009 to 2015
$29.9M
Self Renewal and Differentiation of Human Embryonic Stem CellsP01GM081619 · NIGMS · UNIVERSITY OF WASHINGTON · PI WARE, CAROL B · 2007 to 2017
$20.6M
LABORATORY OF DEVELOPMENTAL BIOLOGYR24HD000836 · NICHD · UNIVERSITY OF WASHINGTON · PI Ian Amos Glass · 1995 to 2026
$16.9M
Mechanisms of Brain Dysmorphology in MN1 C-Terminal Truncation Syndrome, a Novel Intellectual Developmental Disability Disorder P50HD103524 · NICHD · UNIVERSITY OF WASHINGTON · PI Sandra E Juul · 2020 to 2026
$9.9M
Controlling Hematopoietic Lineage Commitment from ESC to PlateletsU01HL099993 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TOROK-STORB, BEVERLY J. · 2009 to 2015
$8.3M
Comprehensive Training in Inter-Disciplinary Oral Health ResearchT90DE021984 · NIDCR · UNIVERSITY OF WASHINGTON · PI Robert Aaron Cornell · 2012 to 2026
$7.9M
MicroRNA Function in Human Embryonic Stem CellsR01GM083867 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2008 to 2011
$1.5M
Acquisition of Embryonic Stem Cell Metabolic Signature - Minority SupplementR01GM097372 · NIGMS · UNIVERSITY OF WASHINGTON · PI RUOHOLA-BAKER, HANNELE · 2011 to 2014
$1.3M
NHLBI NIH HHS U01 HL099993NHLBI NIH HHS U01 HL099997NICHD NIH HHS P50 HD103524NICHD NIH HHS R24 HD000836NIDCR NIH HHS T90 DE021984NIGMS NIH HHS P01 GM081619NIGMS NIH HHS R01 GM083867NIGMS NIH HHS R01 GM097372
6 · The paper itself

Abstract

Over 90% of the U.S. adult population suffers from tooth structure loss due to caries. Most of the mineralized tooth structure is composed of dentin, a material produced and mineralized by ectomesenchyme derived cells known as odontoblasts. Clinicians, scientists, and the general public share the desire to regenerate this missing tooth structure. To bioengineer missing dentin, increased understanding of human tooth development is required. Here we interrogate at the single cell level the signaling interactions that guide human odontoblast and ameloblast development and which determine incisor or molar tooth germ type identity. During human odontoblast development, computational analysis predicts that early FGF and BMP activation followed by later HH signaling is crucial. Application of this sci-RNA-seq analysis generates a differentiation protocol to produce mature hiPSC derived odontoblasts

Indexed as

cell signaling4de novo designed mini binders5enamel knot3human6odontoblast1regenerative dentistry7single cell sequencing2tooth development8

Identifiers

PMID38259324
PMCPMC10802932
OpenAlexW4384945168

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.