Evidence map›Paper›PMID 38259172›Full record

ArticleeLife2024

Tracing the substrate translocation mechanism in P-glycoprotein.

Theresa Gewering, Deepali Waghray, Kristian Parey, Hendrik Jung, Nghi N B Tran, Joel Zapata, Pengyi Zhao, Hao Chen, Dovile Januliene, Gerhard Hummer and 3 more

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. A dual sensor regulates P-glycoprotein's structural plasticity.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Theresa Gewering *Osnabrück University, Department of Biology/Chemistry, Structural Biology Section, Osnabrück, Germany.
Deepali Waghray *Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, United States.
Kristian PareyOsnabrück University, Department of Biology/Chemistry, Structural Biology Section, Osnabrück, Germany.
Hendrik JungDepartment of Theoretical Biophysics, Max Planck Institute of Biophysics, Frankfurt, Germany.ORCID https://orcid.org/0000-0002-2159-0391
Nghi N B TranDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, United States.
Joel ZapataDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, United States.
Pengyi ZhaoDepartment of Chemistry & Environmental Science, New Jersey Institute of Technology, Newark, United States.
Hao ChenDepartment of Chemistry & Environmental Science, New Jersey Institute of Technology, Newark, United States.ORCID https://orcid.org/0000-0001-8090-8593
Dovile JanulieneOsnabrück University, Department of Biology/Chemistry, Structural Biology Section, Osnabrück, Germany.ORCID https://orcid.org/0000-0002-3279-7590
Gerhard HummerDepartment of Theoretical Biophysics, Max Planck Institute of Biophysics, Frankfurt, Germany.ORCID https://orcid.org/0000-0001-7768-746X
Ina UrbatschDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, United States.ORCID https://orcid.org/0000-0002-3080-5649
Arne Moeller *Osnabrück University, Department of Biology/Chemistry, Structural Biology Section, Osnabrück, Germany.ORCID https://orcid.org/0000-0003-1101-5366
Qinghai Zhang *Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, United States.ORCID https://orcid.org/0000-0003-0866-527X

Funding

Studies of P-glycoprotein and drug interactionsR01GM118594 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI ZHANG, QINGHAI · 2016 to 2019
$2.0M
Inhibition or evasion of P-glycoprotein-mediated drug transportR01GM148675 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI Qinghai Zhang · 2023 to 2026
$2.0M
Studies of P-glycoprotein Drug Interactions - Administrative Supplement for Undergraduate Summer ResearchR01GM141216 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI URBATSCH, INA L · 2022 to 2025
$1.3M
NIGMS NIH HHS R01 GM118594NIGMS NIH HHS R01 GM141216NIGMS NIH HHS R01 GM148675NIH HHS GM118594NIH HHS GM141216NIH HHS GM148675
6 · The paper itself

Abstract

P-glycoprotein (Pgp) is a prototypical ATP-binding cassette (ABC) transporter of great biological and clinical significance.Pgp confers cancer multidrug resistance and mediates the bioavailability and pharmacokinetics of many drugs (Juliano and Ling, 1976; Ueda et al., 1986; Sharom, 2011). Decades of structural and biochemical studies have provided insights into how Pgp binds diverse compounds (Loo and Clarke, 2000; Loo et al., 2009; Aller et al., 2009; Alam et al., 2019; Nosol et al., 2020; Chufan et al., 2015), but how they are translocated through the membrane has remained elusive. Here, we covalently attached a cyclic substrate to discrete sites of Pgp and determined multiple complex structures in inward- and outward-facing states by cryoEM. In conjunction with molecular dynamics simulations, our structures trace the substrate passage across the membrane and identify conformational changes in transmembrane helix 1 (TM1) as regulators of substrate transport. In mid-transport conformations, TM1 breaks at glycine 72. Mutation of this residue significantly impairs drug transport of Pgp in vivo, corroborating the importance of its regulatory role. Importantly, our data suggest that the cyclic substrate can exit Pgp without the requirement of a wide-open outward-facing conformation, diverting from the common efflux model for Pgp and other ABC exporters. The substrate transport mechanism of Pgp revealed here pinpoints critical targets for future drug discovery studies of this medically relevant system.

Indexed as

ATP Binding Cassette Transporter, Subfamily B, Member 1Translocation, GeneticATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily BHumansMutationATP-Binding Cassette TransportersATP Binding Cassette Transporter, Subfamily BATP Binding Cassette Transporter, Subfamily B, Member 1ABC transporterbiochemistrychemical biologycovalent ligandcryo-EM structuremechanismmolecular biophysicsmouseoutward-facing conformationP-glycoproteinstructural biologysubstrate translocation

Identifiers

PMID38259172
PMCPMC10945689

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.