Evidence map›Paper›PMID 38257875›Full record

ArticleMicroorganisms2023

High-Throughput Short Sequence Typing Schemes for

Thibault Bourdin, Marie-Ève Benoit, Emilie Bédard, Michèle Prévost, Caroline Quach, Eric Déziel, Philippe Constant

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thibault BourdinCentre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique, 531 Boulevard des Prairies, Laval, QC H7V 1B7, Canada.
Marie-Ève BenoitCHU Sainte-Justine Research Center, Montréal, QC H3T 1C5, Canada.
Emilie BédardDepartment of Civil Engineering, Polytechnique Montréal, Montréal, QC H3T 1J4, Canada.ORCID 0000-0002-1447-929X
Michèle PrévostDepartment of Civil Engineering, Polytechnique Montréal, Montréal, QC H3T 1J4, Canada.
Caroline QuachCHU Sainte-Justine Research Center, Montréal, QC H3T 1C5, Canada.ORCID 0000-0002-1170-9475
Eric DézielCentre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique, 531 Boulevard des Prairies, Laval, QC H7V 1B7, Canada.ORCID 0000-0002-4609-0115
Philippe ConstantCentre Armand-Frappier Santé Biotechnologie, Institut National de la Recherche Scientifique, 531 Boulevard des Prairies, Laval, QC H7V 1B7, Canada.

Funding

Natural Sciences and Engineering Research Council CHRP 523790-18
6 · The paper itself

Abstract

Molecular typing techniques are utilized to determine genetic similarities between bacterial isolates. However, the use of environmental DNA profiling to assess epidemiologic links between patients and their environment has not been fully explored. This work reports the development and validation of two high-throughput short sequence typing (HiSST) schemes targeting the opportunistic pathogens

Indexed as

eDNAgenotypinghealthcare-associated infections (HAIs)molecular typingneonatal intensive care units (NICUs)opportunistic pathogensopportunistic premise plumbing pathogens (OPPP)Pseudomonas paraeruginosaselective medium

Identifiers

PMID38257875
PMCPMC10819370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.