Evidence map›Paper›PMID 38257740›Full record

ArticleViruses2023

Use of Capsid Integrity-qPCR for Detecting Viral Capsid Integrity in Wastewater.

Jessica L Kevill, Kata Farkas, Nicola Ridding, Nicholas Woodhall, Shelagh K Malham, Davey L Jones

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Evaluation of Torquetenovirus (TTV) Particle Integrity Utilizing PMAxx™.International journal of molecular sciences · 2025
    Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Jessica L KevillSchool of Environmental and Natural Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, UK.ORCID 0000-0001-7367-4338
Kata FarkasSchool of Environmental and Natural Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, UK.ORCID 0000-0002-7068-3228
Nicola RiddingSchool of Environmental and Natural Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, UK.
Nicholas WoodhallSchool of Environmental and Natural Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, UK.
Shelagh K MalhamSchool of Ocean Sciences, Bangor University, Menai Bridge, Anglesey LL59 5AB, UK.
Davey L JonesSchool of Environmental and Natural Sciences, Bangor University, Bangor, Gwynedd LL57 2UW, UK.ORCID 0000-0002-1482-4209
Bangor University · GB

Funding

European Union's Horizon Europe research and innovation programme 101057764
6 · The paper itself

Abstract

Quantifying viruses in wastewater via RT-qPCR provides total genomic data but does not indicate the virus capsid integrity or the potential risk for human infection. Assessing virus capsid integrity in sewage is important for wastewater-based surveillance, since discharged effluent may pose a public health hazard. While integrity assays using cell cultures can provide this information, they require specialised laboratories and expertise. One solution to overcome this limitation is the use of photo-reactive monoazide dyes (e.g., propidium monoazide [PMAxx]) in a capsid integrity-RT-qPCR assay (ci-RT-qPCR). In this study, we tested the efficiency of PMAxx dye at 50 μM and 100 μM concentrations on live and heat-inactivated model viruses commonly detected in wastewater, including adenovirus (AdV), hepatitis A (HAV), influenza A virus (IAV), and norovirus GI (NoV GI). The 100 μM PMAxx dye concentration effectively differentiated live from heat-inactivated viruses for all targets in buffer solution. This method was then applied to wastewater samples (

Indexed as

Enterovirus InfectionsHepatitis ANorovirusAdenoviridaeAntigens, ViralCapsidCapsid ProteinsColoring AgentsHumansVirionWastewaterAntigens, ViralCapsid ProteinsColoring AgentsWastewateradenoviruscapsid integrityenteroviruseshuman pathogenic virusesinfluenza virusesOne HealthSARS-CoV-2viability qPCRviral inactivationwaterborne virusesWBEWBS

Identifiers

PMID38257740
PMCPMC10819219
OpenAlexW4390272677

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.