Evidence map›Paper›PMID 38254194›Full record

ArticleEnvironmental microbiome2024

Weather in two climatic regions shapes the diversity and drives the structure of fungal endophytic community of bilberry (Vaccinium myrtillus L.) fruit.

Minh-Phuong Nguyen, Kaisa Lehosmaa, Katalin Toth, Janne J Koskimäki, Hely Häggman, Anna Maria Pirttilä

Abstract read
In one paragraph

Article in Environmental microbiome, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Minh-Phuong NguyenEcology and Genetics Research Unit, University of Oulu, P.O. Box 3000, 90014, Oulu, Finland.ORCID http://orcid.org/0000-0003-3198-7517
Kaisa LehosmaaEcology and Genetics Research Unit, University of Oulu, P.O. Box 3000, 90014, Oulu, Finland. kaisa.lehosmaa@oulu.fi.ORCID http://orcid.org/0000-0001-6810-3282
Katalin TothInari Agriculture Nv, Industriepark Zwijnaarde 7a, 9052, Ghent, Belgium.ORCID http://orcid.org/0000-0001-7422-2210
Janne J KoskimäkiEcology and Genetics Research Unit, University of Oulu, P.O. Box 3000, 90014, Oulu, Finland.ORCID http://orcid.org/0000-0001-8241-3500
Hely HäggmanEcology and Genetics Research Unit, University of Oulu, P.O. Box 3000, 90014, Oulu, Finland.ORCID http://orcid.org/0000-0001-7381-1750
Anna Maria PirttiläEcology and Genetics Research Unit, University of Oulu, P.O. Box 3000, 90014, Oulu, Finland.ORCID http://orcid.org/0000-0002-2455-6375

Funding

Academy of Finland 343565Finnish Cultural Foundation 00220726Kone Foundation 201806416
6 · The paper itself

Abstract

backgroundBilberry (Vaccinium myrtillus L.) is one of the most important economic and natural resources in Northern Europe. Despite its importance, the endophytic fungal community of the fruits has rarely been investigated. Biogeographic patterns and determinants of the fungal diversity in the bilberry fruit are poorly understood, albeit fungal endophytes can have a close relationship with the host plants. Here, we investigated the effect of climatic regions, and their weather conditions within growth season and soil properties on fungal endophytic communities of bilberry fruits collected from northern and southern regions of Finland using high-throughput sequencing technology targeting the internal transcribed spacer 2 ribosomal DNA region for fungi.

resultsSpecies richness and beta diversity (variation in community structure) were higher in the southern compared to the studied northern region. The weather condition of the growth season drove both fungal richness and community structure. Furthermore, abundance of the genera Venturia, Cladosporium, and Podosphaera was influenced by the weather, being different between the south and north regions.

conclusionsWe conclude that diversity and assembly structure of the fungal endophytes in bilberry fruits follow similar patterns as for foliar fungal endophytes, being shaped by various environmental factors, such as the climate and surrounding vegetation.

Indexed as

BilberryClimateCommunity structureDiversityFruit microbiologyFungal endophyteGrowth seasonWeather conditions

Identifiers

PMID38254194
PMCPMC10802051

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.