Evidence map›Paper›PMID 38254191›Full record

ArticlePorcine health management2024

Prevalence and genetic evolution of porcine reproductive and respiratory syndrome virus in commercial fattening pig farms in China.

Chao Li, Jing Zhao, Wansheng Li, Hu Xu, Bangjun Gong, Qi Sun, Zhenyang Guo, Jinhao Li, Lirun Xiang, Yan-Dong Tang and 9 more

Open access · goldAbstract read
In one paragraph

Article in Porcine health management, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 23 citations in OpenAlex.

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  11. Prevalence and genetic diversity ofFrontiers in veterinary science · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Chao Li *State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Jing Zhao *State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Wansheng Li *State Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Hu XuState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Bangjun GongState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Qi SunState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Zhenyang GuoState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Jinhao LiState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Lirun XiangState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Yan-Dong TangState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Chaoliang LengHenan Key Laboratory of Insect Biology in Funiu Mountain, Henan Provincial Engineering Laboratory of Insects Bioreactor, China-UK-NYNU-RRes Joint Laboratory of Insect Biology, Nanyang Normal University, Nanyang, 473061, China.
Qian WangState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Jinmei PengState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Guohui ZhouState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Huairan LiuState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Tongqing AnState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Xuehui CaiState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Zhi-Jun TianState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China.
Hongliang ZhangState Key Laboratory for Animal Disease Control and Prevention, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, CAAS, No. 678 Haping Road, Xiangfang District, Harbin, 150001, China. zhanghongliang01@caas.cn.
Harbin Veterinary Research Institute · CNChinese Academy of Agricultural Sciences · CNNanyang Normal University · CN

Funding

National funded postdoctoral researcher program GZC20233062National Key Research and Development Program 2022YFF0711004National Natural Science Foundation of China 32002315National Natural Science Foundation of China 32172890Natural Science Foundation of Heilongjiang Province YQ2022C042State Key Laboratory of Veterinary Biotechnology Foundation SKLVBF202208
6 · The paper itself

Abstract

backgroundTo investigate the prevalence and evolution of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) at commercial fattening pig farms, a total of 1397 clinical samples were collected from a single fattening cycle at seven pig farms in five provinces of China from 2020 to 2021.

resultsThe RT‒PCR results revealed that PRRSV was present on all seven farms, and the percentage of PRRSV-positive individuals was 17.54-53.33%. A total of 344 partial NSP2 gene sequences and 334 complete ORF5 gene sequences were obtained from the positive samples. The statistical results showed that PRRSV-2 was present on all seven commercial fattening farms, and PRRSV-1 was present on only one commercial fattening farm. A total of six PRRSV-2 subtypes were detected, and five of the seven farms had two or more PRRSV-2 subtypes. L1.8 (L1C) PRRSV was the dominant epidemic strain on five of the seven pig farms. Sequence analysis of L1.8 (L1C) PRRSV from different commercial fattening pig farms revealed that its consistency across farms varied substantially. The amino acid alignment results demonstrated that there were 131 aa discontinuous deletions in NSP2 between different L1.8 (L1C) PRRSV strains and that the GP5 mutation in L1.8 (L1C) PRRSV was mainly concentrated in the peptide signal region and T-cell epitopes. Selection pressure analysis of GP5 revealed that the use of the PRRSV MLV vaccine had no significant episodic diversifying effect on L1.8 (L1C) PRRSV.

conclusionPRRSV infection is common at commercial fattening pig farms in China, and the percentage of positive individuals is high. There are multiple PRRSV subtypes of infection at commercial fattening pig farms in China. L1.8 (L1C) is the main circulating PRRSV strain on commercial fattening pig farms. L1.8 (L1C) PRRSV detected at different commercial fattening pig farms exhibited substantial differences in consistency but similar molecular characteristics. The pressure on the GP5 of L1.8 (L1C) PRRSV may not be directly related to the use of the vaccines.

Identifiers

PMID38254191
PMCPMC10801985
OpenAlexW4391088826

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.