Evidence map›Paper›PMID 38252628›Full record

ArticlePLoS pathogens2024

The bZIP transcription factor BIP1 of the rice blast fungus is essential for infection and regulates a specific set of appressorium genes.

Karine Lambou, Andrew Tag, Alexandre Lassagne, Jérôme Collemare, Pierre-Henri Clergeot, Crystel Barbisan, Philippe Perret, Didier Tharreau, Joelle Millazo, Elia Chartier and 7 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Pyricularia oryzae: Lab star and field scourge.Molecular plant pathology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 3 countries.

Karine LambouCNRS-Bayer Crop Science, UMR 5240 MAP, Lyon, France.ORCID 0000-0001-5558-6860
Andrew TagDepartment of Biology, Texas A&M University. College Station, Texas, United States of America.
Alexandre LassagnePlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Jérôme CollemareCNRS-Bayer Crop Science, UMR 5240 MAP, Lyon, France.
Pierre-Henri ClergeotCNRS-Bayer Crop Science, UMR 5240 MAP, Lyon, France.
Crystel BarbisanBiochemistry Department, Bayer Crop Science SAS, Lyon, France.
Philippe PerretBiochemistry Department, Bayer Crop Science SAS, Lyon, France.
Didier TharreauPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Joelle MillazoPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Elia ChartierPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Ronald P De VriesFungal Physiology, Westerdijk Fungal Biodiversity Institute & Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands.
Judith HirschPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Jean-Benoit MorelPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Roland BeffaBiochemistry Department, Bayer Crop Science SAS, Lyon, France.
Thomas KrojPlant Health Institute of Montpellier (PHIM), Montpellier University, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
Terry ThomasDepartment of Biology, Texas A&M University. College Station, Texas, United States of America.
Marc-Henri LebrunCNRS-Bayer Crop Science, UMR 5240 MAP, Lyon, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre National de la Recherche Scientifique · FRBayer (France) · FRTexas A&M University · USUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rice blast fungus Magnaporthe oryzae differentiates specialized cells called appressoria that are required for fungal penetration into host leaves. In this study, we identified the novel basic leucine zipper (bZIP) transcription factor BIP1 (B-ZIP Involved in Pathogenesis-1) that is essential for pathogenicity. BIP1 is required for the infection of plant leaves, even if they are wounded, but not for appressorium-mediated penetration of artificial cellophane membranes. This phenotype suggests that BIP1 is not implicated in the differentiation of the penetration peg but is necessary for the initial establishment of the fungus within plant cells. BIP1 expression was restricted to the appressorium by both transcriptional and post-transcriptional control. Genome-wide transcriptome analysis showed that 40 genes were down regulated in a BIP1 deletion mutant. Most of these genes were specifically expressed in the appressorium. They encode proteins with pathogenesis-related functions such as enzymes involved in secondary metabolism including those encoded by the ACE1 gene cluster, small secreted proteins such as SLP2, BAS2, BAS3, and AVR-Pi9 effectors, as well as plant cuticle and cell wall degrading enzymes. Interestingly, this BIP1 network is different from other known infection-related regulatory networks, highlighting the complexity of gene expression control during plant-fungal interactions. Promoters of BIP1-regulated genes shared a GCN4/bZIP-binding DNA motif (TGACTC) binding in vitro to BIP1. Mutation of this motif in the promoter of MGG_08381.7 from the ACE1 gene cluster abolished its appressorium-specific expression, showing that BIP1 behaves as a transcriptional activator. In summary, our findings demonstrate that BIP1 is critical for the expression of early invasion-related genes in appressoria. These genes are likely needed for biotrophic invasion of the first infected host cell, but not for the penetration process itself. Through these mechanisms, the blast fungus strategically anticipates the host plant environment and responses during appressorium-mediated penetration.

Indexed as

AscomycotaMagnaportheOryzaBasic-Leucine Zipper Transcription FactorsFungal ProteinsGene Expression Regulation, FungalPlant DiseasesBasic-Leucine Zipper Transcription FactorsFungal Proteins

Identifiers

PMID38252628
PMCPMC10833574
OpenAlexW4391095852

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.