Evidence map›Paper›PMID 38252353›Full record

ArticleMolecular biology reports2024

The non-vesicle cell-free DNA (cfDNA) induces cell transformation associated with horizontal DNA transfer.

D A De La Cruz-Sigüenza, J P Reyes-Grajeda, M A Velasco-Velázquez, C Trejo-Becerril, E Pérez-Cárdenas, A Chávez-Blanco, L Taja-Chayeb, G Domínguez-Gómez, M P Ramos-Godinez, A González-Fierro and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

D A De La Cruz-SigüenzaSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
J P Reyes-GrajedaProtein Structure Laboratory, Instituto Nacional de Medicina Genomica (INMEGEN), Tlalpan, 14610, Mexico City, Mexico.
M A Velasco-VelázquezDepartment of Pharmacology, Faculty of Medicine, Universidad Nacional Autónoma de México (UNAM), Coyoacan, 04510, Mexico City, Mexico.
C Trejo-BecerrilSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
E Pérez-CárdenasSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
A Chávez-BlancoSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
L Taja-ChayebSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
G Domínguez-GómezSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
M P Ramos-GodinezDepartment of Pathology, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
A González-FierroSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico.
A Dueñas-GonzálezSubdirection of Basic Research, Instituto Nacional de Cancerología (INCan), Tlalpan, 14080, Mexico City, Mexico. alfonso_duenasg@yahoo.com.
Instituto Nacional de Cancerología · MXUniversidad Nacional Autónoma de México · MXNational Institute of Genomic Medicine · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCell-free DNA (cfDNA) is a source for liquid biopsy used for cancer diagnosis, therapy selection, and disease monitoring due to its non-invasive nature and ease of extraction. However, cfDNA also participates in cancer development and progression by horizontal transfer. In humans, cfDNA circulates complexed with extracellular vesicles (EV) and macromolecular complexes such as nucleosomes, lipids, and serum proteins. The present study aimed to demonstrate whether cfDNA not associated with EV induces cell transformation and tumorigenesis.

methodsSupernatant of the SW480 human colon cancer cell line was processed by ultracentrifugation to obtain a soluble fraction (SF) and a fraction associated with EV (EVF). Primary murine embryonic fibroblast cells (NIH3T3) underwent passive transfection with these fractions, and cell proliferation, cell cycle, apoptosis, cell transformation, and tumorigenic assays were performed. Next, cfDNA was analyzed by electronic microscopy, and horizontal transfer was assessed by human mutant KRAS in recipient cells via PCR and recipient cell internalization via fluorescence microscopy.

resultsThe results showed that the SF but not the EVF of cfDNA induced proliferative and antiapoptotic effects, cell transformation, and tumorigenesis in nude mice, which were reduced by digestion with DNAse I and proteinase K. These effects were associated with horizontal DNA transfer and cfDNA internalization into recipient cells.

conclusionsThe results suggest pro-tumorigenic effects of cfDNA in the SF that can be offset by enzyme treatment. Further exploration of the horizontal tumor progression phenomenon mediated by cfDNA is needed to determine whether its manipulation may play a role in cancer therapy.

Indexed as

Cell-Free Nucleic AcidsAnimalsCarcinogenesisDNAHumansMiceMice, NudeNIH 3T3 CellsCell-Free Nucleic AcidsDNACell free nucleic acidsExtracellular vesiclesOncogenic transformationVirtosome

Identifiers

PMID38252353
PMCPMC10803523
OpenAlexW4391109335

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.