Evidence map›Paper›PMID 38250732›Full record

ArticleShape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.)2023

SlicerSALT: From Medical Images to Quantitative Insights of Anatomy.

Jared Vicory, Ye Han, Juan Carlos Prieto, David Allemang, Mathieu Leclercq, Connor Bowley, Harald Scheirich, Jean-Christophe Fillion-Robin, Steve Pizer, James Fishbaugh and 3 more

Abstract read
In one paragraph

Article in Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Jared VicoryKitware Inc, Carrboro, NC 27510, USA.ORCID 0000-0001-6041-5580
Ye HanKitware Inc, Carrboro, NC 27510, USA.ORCID 0000-0002-7001-4753
Juan Carlos PrietoUniversity of North Carolina, Chapel Hill, NC 27599, USA.ORCID 0000-0002-3778-9098
David AllemangKitware Inc, Carrboro, NC 27510, USA.ORCID 0000-0002-0227-211X
Mathieu LeclercqUniversity of North Carolina, Chapel Hill, NC 27599, USA.
Connor BowleyKitware Inc, Carrboro, NC 27510, USA.
Harald ScheirichKitware Inc, Carrboro, NC 27510, USA.
Jean-Christophe Fillion-RobinKitware Inc, Carrboro, NC 27510, USA.
Steve PizerUniversity of North Carolina, Chapel Hill, NC 27599, USA.ORCID 0000-0002-4250-6531
James FishbaughKitware Inc, Carrboro, NC 27510, USA.ORCID 0009-0003-9675-6776
Guido GerigNew York University, Brooklyn, NY 11201, USA.ORCID 0000-0002-9547-6233
Martin StynerUniversity of North Carolina, Chapel Hill, NC 27599, USA.ORCID 0000-0002-8747-5118
Beatriz PaniaguaKitware Inc, Carrboro, NC 27510, USA.ORCID 0000-0002-8437-6632

Funding

Preclinical CoreP50HD103573 · NICHD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Mark D Shen · 2020 to 2026
$9.7M
Computer Modeling of the Tricuspid Valve in Hypoplastic Left Heart SyndromeR01HL153166 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI JOLLEY, MATTHEW · 2020 to 2024
$3.7M
Shape Analysis Toolbox: From medical images to quantitative insights of anatomyR01EB021391 · NIBIB · KITWARE, INC. · PI PANIAGUA, BEATRIZ · 2016 to 2024
$3.5M
Shape Analysis Toolbox: From medical images to quantitative insights of anatomyR56EB021391 · NIBIB · KITWARE, INC. · PI PANIAGUA, BEATRIZ · 2021 to 2021
$436k
NHLBI NIH HHS R01 HL153166NIBIB NIH HHS R01 EB021391NIBIB NIH HHS R56 EB021391NICHD NIH HHS P50 HD103573
6 · The paper itself

Abstract

Three-dimensional (3D) shape lies at the core of understanding the physical objects that surround us. In the biomedical field, shape analysis has been shown to be powerful in quantifying how anatomy changes with time and disease. The Shape AnaLysis Toolbox (SALT) was created as a vehicle for disseminating advanced shape methodology as an open source, free, and comprehensive software tool. We present new developments in our shape analysis software package, including easy-to-interpret statistical methods to better leverage the quantitative information contained in SALT's shape representations. We also show SlicerPipelines, a module to improve the usability of SALT by facilitating the analysis of large-scale data sets, automating workflows for non-expert users, and allowing the distribution of reproducible workflows.

Indexed as

Open-source softwareShape analysisStatistics

Identifiers

PMID38250732
PMCPMC10798161

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.