Evidence map›Paper›PMID 38250062›Full record

ReviewFrontiers in immunology2023

Biomarkers and molecular endotypes of sarcoidosis: lessons from omics and non-omics studies.

Hong-Long Ji, Nan Mile S Xi, Chandra Mohan, Xiting Yan, Krishan G Jain, Qun Sophia Zang, Vivian Gahtan, Runzhen Zhao

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Cardiac sarcoidosis: diagnosis and management.Frontiers in cardiovascular medicine · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Hong-Long JiBurn and Shock Trauma Research Institute, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL, United States.
Nan Mile S XiDepartment of Mathematics and Statistics at Loyola University Chicago, Chicago, IL, United States.
Chandra MohanBiomedical Engineering & Medicine, University of Houston, Houston, TX, United States.
Xiting YanDepartment of Medicine, Division of Pulmonary, Critical Care, and Sleep Medicine Yale New Haven Hospital and Yale School of Medicine, New Haven, CT, United States.
Krishan G JainBurn and Shock Trauma Research Institute, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL, United States.
Qun Sophia ZangBurn and Shock Trauma Research Institute, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL, United States.
Vivian GahtanBurn and Shock Trauma Research Institute, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL, United States.
Runzhen ZhaoBurn and Shock Trauma Research Institute, Stritch School of Medicine, Loyola University Chicago Health Sciences Division, Maywood, IL, United States.
Loyola University Chicago · USUniversity of Houston · USYale New Haven Hospital · US

Funding

NOVEL PARACRINE MECHANISMS FOR CELL-BASED THERAPY OF INJURED LUNGSR01HL134828 · NHLBI · UNIVERSITY OF TEXAS HLTH CTR AT TYLER · PI JI, HONG-LONG · 2017 to 2025
$3.4M
Pathological Responses to Mitochondrial ROS in Sepsis-Induced Cardiac DysfunctionR01GM111295 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI ZANG, QUN SOPHIA · 2014 to 2022
$2.7M
Graph Learning of Cell-cell Communications in Spatial TranscriptomicsR01LM014087 · NLM · YALE UNIVERSITY · PI WANG, ZUOHENG, YAN, XITING · 2022 to 2025
$1.5M
Cardiac Macrophage Plasticity in Sepsis-induced CardiomyopathyR21AI178434 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI SUN, YUXIANG, ZANG, QUN SOPHIA · 2023 to 2024
$433k
Regulation of Cardiac Metabolic Plasticity in SepsisR21AI166913 · NIAID · LOYOLA UNIVERSITY CHICAGO · PI ZANG, QUN SOPHIA · 2022 to 2023
$424k
Deep and Integrative Analysis of RNA Sequencing Data to Identify Pathogenesis Heterogeneity of Chronic Lung DiseaseR21LM012884 · NLM · YALE UNIVERSITY · PI YAN, XITING · 2018 to 2019
$415k
NHLBI NIH HHS R01 HL134828NIAID NIH HHS R21 AI166913NIAID NIH HHS R21 AI178434NIGMS NIH HHS R01 GM111295NLM NIH HHS R01 LM014087NLM NIH HHS R21 LM012884
6 · The paper itself

Abstract

Sarcoidosis is a chronic granulomatous disorder characterized by unknown etiology, undetermined mechanisms, and non-specific therapies except TNF blockade. To improve our understanding of the pathogenicity and to predict the outcomes of the disease, the identification of new biomarkers and molecular endotypes is sorely needed. In this study, we systematically evaluate the biomarkers identified through Omics and non-Omics approaches in sarcoidosis. Most of the currently documented biomarkers for sarcoidosis are mainly identified through conventional "one-for-all" non-Omics targeted studies. Although the application of machine learning algorithms to identify biomarkers and endotypes from unbiased comprehensive Omics studies is still in its infancy, a series of biomarkers, overwhelmingly for diagnosis to differentiate sarcoidosis from healthy controls have been reported. In view of the fact that current biomarker profiles in sarcoidosis are scarce, fragmented and mostly not validated, there is an urgent need to identify novel sarcoidosis biomarkers and molecular endotypes using more advanced Omics approaches to facilitate disease diagnosis and prognosis, resolve disease heterogeneity, and facilitate personalized medicine.

Indexed as

Granulomatous Disease, ChronicSarcoidosisAlgorithmsBiomarkersHumansMachine LearningBiomarkersbiomarkerendotypemachine learning algorithmsomicssarcoidosis

Identifiers

PMID38250062
PMCPMC10797773
OpenAlexW4390585130

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.