Evidence map›Paper›PMID 38243062›Full record

ArticleThe Journal of antibiotics2024

Mass spectrometry-guided isolation of thiodiketopiperazines from an EtOAc-extract of Setosphaeria rostrata culture medium and their anti-skin aging effects on TNF-α-induced human dermal fibroblasts.

Haeun Kwon, Hee Woon Ann, Sojung Park, Jaeyoung Kwon, Keunwan Park, Seung Mok Ryu, Yuanqiang Guo, Jae-Jin Kim, Joung Han Yim, Il-Chan Kim and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in The Journal of antibiotics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Red light (630 nm) combined with low-dose ALA-PDT: a novel strategy for collagen remodeling and anti-aging efficacy.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 2 countries.

Haeun KwonDepartment of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Hee Woon AnnDepartment of Life Science, Gachon University, Seongnam, 13120, Republic of Korea.
Sojung ParkDepartment of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Jaeyoung KwonNatural Product Informatics Research Center, Korea Institute of Science and Technology (KIST) Gangneung Institute, Gangneung, 25451, Republic of Korea.
Keunwan ParkNatural Product Informatics Research Center, Korea Institute of Science and Technology (KIST) Gangneung Institute, Gangneung, 25451, Republic of Korea.
Seung Mok RyuHerbal Medicine Resources Center, Korea Institute of Oriental Medicine, Naju, 58245, Republic of Korea.
Yuanqiang GuoState Key Laboratory of Medicinal Chemical Biology, College of Pharmacy, and Tianjin Key Laboratory of Molecular Drug Research, Nankai University, Tianjin, 300350, People's Republic of China.
Jae-Jin KimDivision of Environmental Science and Ecological Engineering, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea.
Joung Han YimDivision of Life Sciences, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.
Il-Chan KimDivision of Life Sciences, Korea Polar Research Institute, Incheon, 21990, Republic of Korea.
Sang Hee ShimNatural Products Research Institute, College of Pharmacy, Seoul National University, Seoul, 08826, Republic of Korea.
Sullim LeeDepartment of Life Science, Gachon University, Seongnam, 13120, Republic of Korea. sullimlee@gachon.ac.kr.
Dongho LeeDepartment of Plant Biotechnology, College of Life Sciences and Biotechnology, Korea University, Seoul, 02841, Republic of Korea. dongholee@korea.ac.kr.
Korea University · KRGachon University · KRKorea Institute of Science and Technology · KRKorea Polar Research Institute · KRKorea Institute of Oriental Medicine · KRNankai University · CNSeoul National University · KR

Funding

Korea Polar Research Institute (KOPRI) PE23150National Research Foundation of Korea (NRF) NRF-2019R1A2C1006226National Research Foundation of Korea (NRF) NRF-2022R1A4A3022401
6 · The paper itself

Abstract

Using mass spectrometry (MS)-guided isolation methods, a new thiodiketopiperazine derivative (1) and exserohilone (2) were isolated from an EtOAc-extract of Setosphaeria rostrata culture medium. The chemical structure of the new compound was elucidated by MS and NMR spectroscopy, and the absolute configurations were established by the quantum mechanical calculations of electronic circular dichroism. All isolated compounds were examined for their effects on reactive oxygen species (ROS) production, matrix metalloproteinase 1 (MMP-1) secretion, and procollagen type I α1 secretion in tumor necrosis factor (TNF)-α-induced human dermal fibroblasts. Compound 1 and exserohilone (2) exhibited the inhibition of TNF-α-induced ROS generation and MMP-1 secretion. Additionally, compound 1 and exserohilone (2) increased the procollagen type I α1 secretion. Compound 1 docked computationally into the active site of MMP-1 (-6.0 kcal/mol).

Indexed as

AscomycotaMatrix Metalloproteinase 1Tumor Necrosis Factor-alphaFibroblastsHumansReactive Oxygen SpeciesMatrix Metalloproteinase 1Reactive Oxygen SpeciesTumor Necrosis Factor-alpha

Identifiers

PMID38243062
OpenAlexW4391029220

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.