Evidence map›Paper›PMID 38241313›Full record

ArticlePloS one2024

Distinctive genes and signaling pathways associated with type 2 diabetes-related periodontitis: Preliminary study.

Poliana Mendes Duarte, Bruno César de Vasconcelos Gurgel, Tamires Szeremeske Miranda, Juliana Sardenberg, Tongjun Gu, Ikramuddin Aukhil

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Poliana Mendes DuarteDepartment of Periodontology, University of Florida College of Dentistry, Gainesville, FL, United States of America.ORCID 0000-0001-8872-5943
Bruno César de Vasconcelos GurgelDepartment of Dentistry, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Tamires Szeremeske MirandaDepartment of Dentistry, São Judas Tadeu University, São Paulo, SP, Brazil.
Juliana SardenbergDepartment of Periodontology, University of Florida College of Dentistry, Gainesville, FL, United States of America.
Tongjun GuICBR Bioinformatics, University of Florida, Gainesville, FL, United States of America.
Ikramuddin AukhilECU School of Dental Medicine, East Carolina University, Greenville, NC, United States of America.
University of Florida · USEast Carolina University · USUniversidade Federal do Rio Grande do Norte · BRUniversidade São Judas Tadeu · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The biological mechanisms underlying the pathogenesis of type 2 diabetes (T2DM)-related periodontitis remain unclear. This cross-sectional study evaluated the distinctive transcriptomic changes between tissues with periodontal health and with periodontitis in patients with T2DM. In this cross-sectional study, whole transcriptome sequencing was performed on gingival biopsies from non-periodontitis and periodontitis tissues from non-diabetic and diabetic patients. A differentially expressed gene (DEG) analysis and Ingenuity Pathway Analysis (IPA) assessed the genes and signaling pathways associated with T2DM-related periodontitis. Immunohistochemistry was performed to validate selected DEGs possibly involved in T2DM-related periodontitis. Four hundred and twenty and one thousand five hundred and sixty-three DEGs (fold change ≥ 2) were uniquely identified in the diseased tissues of non-diabetic and diabetic patients, respectively. The IPA predicted the activation of Phagosome Formation, Cardiac β-adrenergic, tRNA Splicing, and PI3K/AKT pathways. The IPA also predicted the inhibition of Cholesterol Biosynthesis, Adrenomedullin, and Inositol Phosphate Compounds pathways in T2DM-related periodontitis. Validation of DEGs confirmed changes in protein expression of PTPN2, PTPN13, DHCR24, PIK3R2, CALCRL, IL1RN, IL-6R and ITGA4 in diseased tissues in diabetic subjects. Thus, these preliminary findings indicate that there are specific genes and functional pathways that may be involved in the pathogenesis of T2DM-related periodontitis.

Indexed as

Diabetes Mellitus, Type 2PeriodontitisCross-Sectional StudiesHumansPhosphatidylinositol 3-KinasesSignal TransductionTranscriptomePhosphatidylinositol 3-Kinases

Identifiers

PMID38241313
PMCPMC10798476
OpenAlexW4391019742

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.