Evidence map›Paper›PMID 38240185›Full record

ArticleJournal of extracellular vesicles2024

Differential temporal release and lipoprotein loading in B. thetaiotaomicron bacterial extracellular vesicles.

Rokas Juodeikis, Carlo Martins, Gerhard Saalbach, Jake Richardson, Todor Koev, Dave J Baker, Marianne Defernez, Martin Warren, Simon R Carding

Open access · goldAbstract read
In one paragraph

Article in Journal of extracellular vesicles, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Rokas JuodeikisFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.ORCID 0000-0002-0504-7719
Carlo MartinsProteomics Facility, John Innes Centre, Norwich, UK.
Gerhard SaalbachProteomics Facility, John Innes Centre, Norwich, UK.
Jake RichardsonProteomics Facility, John Innes Centre, Norwich, UK.
Todor KoevFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.
Dave J BakerFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.
Marianne DefernezFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.
Martin WarrenFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.ORCID 0000-0002-6028-6456
Simon R CardingFood, Microbiome, and Health Research Programme, Quadram Institute Bioscience, Norwich, UK.ORCID 0000-0002-2383-9701
John Innes Centre · GBQuadram Institute · GBUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L004291/1
6 · The paper itself

Abstract

Bacterial extracellular vesicles (BEVs) contribute to stress responses, quorum sensing, biofilm formation and interspecies and interkingdom communication. However, the factors that regulate their release and heterogeneity are not well understood. We set out to investigate these factors in the common gut commensal Bacteroides thetaiotaomicron by studying BEV release throughout their growth cycle. Utilising a range of methods, we demonstrate that vesicles released at different stages of growth have significantly different composition, with early vesicles enriched in specifically released outer membrane vesicles (OMVs) containing a larger proportion of lipoproteins, while late phase BEVs primarily contain lytic vesicles with enrichment of cytoplasmic proteins. Furthermore, we demonstrate that lipoproteins containing a negatively charged signal peptide are preferentially incorporated in OMVs. We use this observation to predict all Bacteroides thetaiotaomicron OMV enriched lipoproteins and analyse their function. Overall, our findings highlight the need to understand media composition and BEV release dynamics prior to functional characterisation and define the theoretical functional capacity of Bacteroides thetaiotaomicron OMVs.

Indexed as

Bacteroides thetaiotaomicronExtracellular VesiclesLipoproteinsLipoproteinsbacterial extracellular vesiclesBacteroidesBEVOMVouter membrane vesiclesproteomics

Identifiers

PMID38240185
PMCPMC10797578
OpenAlexW4391028225

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.